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prophyle
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prophasm2
MIT License
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Optimizations
#20
OndrejSladky
closed
1 day ago
0
More robust hash function
#19
OndrejSladky
closed
1 day ago
0
Printing forward extension directly to output.
#18
OndrejSladky
closed
1 day ago
0
Extra large kmers
#17
OndrejSladky
closed
1 day ago
0
Support for k-mer sizes > 64
#16
OndrejSladky
closed
1 day ago
0
Support for large k-mers
#15
OndrejSladky
closed
6 months ago
3
Use more compiler combinations
#14
karel-brinda
closed
6 months ago
0
Improved integration tests
#13
karel-brinda
closed
6 months ago
0
2x slower with k=18
#12
karel-brinda
closed
1 day ago
3
Minimum k-mer abundancies
#11
OndrejSladky
closed
6 months ago
0
Parallelism
#10
OndrejSladky
closed
6 months ago
1
Step 2: mimicked Prophasm interface
#9
OndrejSladky
closed
6 months ago
1
Feature request: Reduce memory requirements for each simplitig by printing the right extensions directly to output.
#8
OndrejSladky
closed
1 day ago
0
Step 1: Tailored camel's local for simplitigs
#7
OndrejSladky
closed
8 months ago
0
Feature request: k-mer length >32 with `-large` version included
#6
karel-brinda
closed
6 months ago
2
Feature request: Rolling hashing
#5
karel-brinda
closed
5 months ago
1
Feature request: Parallelism
#4
karel-brinda
closed
6 months ago
2
Feature request: Support for k-mer frequencies
#3
karel-brinda
closed
6 months ago
0
Step 2: intersections & deletions; interface mimicked from ProphAsm 1
#2
karel-brinda
closed
6 months ago
0
Step 1: Efficient computation from KmerCamel tailored to simplitigs
#1
karel-brinda
closed
8 months ago
0