tudorache
commented
9 years ago Can't reproduce. However, we should add some checks for NPE in the code to prevent this bug.
Open tudorache opened 9 years ago
tudorache
commented
9 years ago Can't reproduce. However, we should add some checks for NPE in the code to prevent this bug.
Reported on the mailing list:
Error 1 Logged at Tue Dec 23 09:10:15 CST 2014
NullPointerException: null
protege-259.log
INFO Starting Protege Desktop (Version 5.0.0, Build = beta-15) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Platform: org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Java: JVM 1.8.0_25-b18 Memory: 259M org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Language: en, Country: US org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Framework: Apache Software Foundation (1.5) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO OS: windows7 (6.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Processor: x86 org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Cajun Visualization Library (1.0.2) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Guava: Google Core Libraries for Java (17.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: DL Query (1.1.4) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWLViz (4.1.4) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Protege OWL Code Generation (1.1.0.2013_04_03_1042) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWL Difference (4.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Protege Editor OWL (5.0.0.beta-15) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Protege SPARQL Plugin (1.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Explanation Workbench (1.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Protege HermiT Integration (1.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OntoGraf (1.0.3) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWL Difference Engine (1.0.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWLAPI RDF Library (1.0.2) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWLAPI Distribution (3.5.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: ACE View Tab (1.3.1.2011_03_18_1133) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Pellet Reasoner Plug-in (2.2.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWL2Query Protege Plug-in (1.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWLDiff Protege plugin (0.2.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Annotation Template View (2.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Bookmark View (1.2.3) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OWLDoc (2.0.0) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Cardinality View (1.1.2) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Change (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Cloud Views (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Existential Tree (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Matrix Views (1.1.2) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: OBO tools (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Annotation Search (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: BeanShell (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: Taxonomy Example View (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: URI Utilities (1.1.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: HermiT Reasoner (1.3.8) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Plugin: SADI plugin (1.2.1) org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Cajun Visualization Library Plugin has no plugin.xml resource org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Guava: Google Core Libraries for Java Plugin has no plugin.xml resource org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO OWL Difference Engine Plugin has no plugin.xml resource org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO OWLAPI RDF Library Plugin has no plugin.xml resource org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO OWLAPI Distribution Plugin has no plugin.xml resource org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Using OWL API version 3.5.0 org.protege.editor.owl.OWLEditorKit[FelixDispatchQueue] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Setting active ontology to OntologyID(OntologyIRI(http://www.semanticweb.org/dr.kofinyamekye/ontologies/2014/11/untitled-ontology-268)) org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO ... active ontology changed org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Cannot generate ontology catalog for ontology at http://www.semanticweb.org/dr.kofinyamekye/ontologies/2014/11/untitled-ontology-268 org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Setting active ontology to OntologyID(OntologyIRI(http://www.semanticweb.org/dr.kofinyamekye/ontologies/2014/11/untitled-ontology-268)) org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO ... active ontology changed org.protege.editor.owl.model.OWLModelManagerImpl[FelixDispatchQueue] INFO Auto-update last performed: Mon Dec 01 12:00:35 CST 2014 org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Auto-update has not been performed today. Running it. org.protege.editor.core.ProtegeApplication[FelixDispatchQueue] INFO Using OWL API version 3.5.0 org.protege.editor.owl.OWLEditorKit[AWT-EventQueue-0] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO Adding root folder: C:\Users\Dr. Kofi Nyamekye\Google Drive\PROTEGE WORKSPACE\ONTOLOGY ... org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ...done org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO loading OntologyID(Anonymous-0) from file:/C:/Users/Dr.%20Kofi%20Nyamekye/Google%20Drive/PROTEGE%20WORKSPACE/ONTOLOGY/flight.owl org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO Setting active ontology to OntologyID(OntologyIRI(http://protege.stanford.edu/swbp/flight.owl)) org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ... active ontology changed org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO Setting active ontology to OntologyID(OntologyIRI(http://protege.stanford.edu/swbp/flight.owl)) org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO Rebuilding entity indices... org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ... rebuilt in 0 ms org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] INFO ... active ontology changed org.protege.editor.owl.model.OWLModelManagerImpl[AWT-EventQueue-0] WARN Error logged org.protege.editor.core.ui.error.ErrorLog[AWT-EventQueue-0] java.lang.NullPointerException at java.util.TreeMap.compare(Unknown Source) at java.util.TreeMap.put(Unknown Source) at java.util.TreeSet.add(Unknown Source) at org.protege.ontograf.common.ProtegeGraphModel.createDomainRangeRels(ProtegeGraphModel.java:586) at org.protege.ontograf.common.ProtegeGraphModel.getDomainRangeRelationships(ProtegeGraphModel.java:599) at org.protege.ontograf.common.ProtegeGraphModel.loadDomainRangeRels(ProtegeGraphModel.java:285) at org.protege.ontograf.common.ProtegeGraphModel.createIncomingRelationships(ProtegeGraphModel.java:252) at org.protege.ontograf.common.ProtegeGraphModel.show(ProtegeGraphModel.java:110) at org.protege.ontograf.common.GraphController.showOWLClass(GraphController.java:225) at org.protege.ontograf.OntoGrafView.updateView(OntoGrafView.java:219) at org.protege.editor.owl.ui.view.cls.AbstractOWLClassViewComponent.updateView(AbstractOWLClassViewComponent.java:36) at org.protege.editor.owl.ui.view.cls.AbstractOWLClassViewComponent.updateView(AbstractOWLClassViewComponent.java:19) at org.protege.editor.owl.ui.view.AbstractOWLSelectionViewComponent.updateViewContentAndHeader(AbstractOWLSelectionViewComponent.java:202) at org.protege.editor.owl.ui.view.AbstractOWLSelectionViewComponent.initialiseOWLView(AbstractOWLSelectionViewComponent.java:119) at org.protege.editor.owl.ui.view.AbstractOWLViewComponent.initialise(AbstractOWLViewComponent.java:61) at org.protege.editor.core.ui.view.View.createContent(View.java:439) at org.protege.editor.core.ui.view.View.createUI(View.java:219) at org.protege.editor.core.ui.view.View$1.hierarchyChanged(View.java:149) at java.awt.Component.processHierarchyEvent(Unknown Source) at java.awt.Component.processEvent(Unknown Source) at java.awt.Container.processEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.Component.createHierarchyEvents(Unknown Source) at java.awt.Container.createHierarchyEvents(Unknown Source) at java.awt.Container.createHierarchyEvents(Unknown Source) at java.awt.Container.createHierarchyEvents(Unknown Source) at java.awt.Container.createHierarchyEvents(Unknown Source) at java.awt.Container.createHierarchyEvents(Unknown Source) at java.awt.Component.show(Unknown Source) at java.awt.Component.show(Unknown Source) at java.awt.Component.setVisible(Unknown Source) at javax.swing.JComponent.setVisible(Unknown Source) at javax.swing.JTabbedPane.fireStateChanged(Unknown Source) at javax.swing.JTabbedPane$ModelListener.stateChanged(Unknown Source) at javax.swing.DefaultSingleSelectionModel.fireStateChanged(Unknown Source) at javax.swing.DefaultSingleSelectionModel.setSelectedIndex(Unknown Source) at javax.swing.JTabbedPane.setSelectedIndexImpl(Unknown Source) at javax.swing.JTabbedPane.setSelectedIndex(Unknown Source) at javax.swing.plaf.basic.BasicTabbedPaneUI$Handler.mousePressed(Unknown Source) at java.awt.Component.processMouseEvent(Unknown Source) at javax.swing.JComponent.processMouseEvent(Unknown Source) at java.awt.Component.processEvent(Unknown Source) at java.awt.Container.processEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source) at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source) at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Window.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.EventQueue.dispatchEventImpl(Unknown Source) at java.awt.EventQueue.access$400(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue.dispatchEvent(Unknown Source) at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.run(Unknown Source)