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proteomicsunitcrg / qcloud2-pipeline

QCloud2 pipeline
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MPI C4L - some files are not inserted #64

Closed rolivella closed 3 years ago

rolivella commented 3 years ago

[2021-07-19 11:32:25] Uploading file blank_QC03_210717155026.raw...skipped [2021-07-19 11:26:24] Uploading file blank_QC03_210715235536.raw...skipped

Sin título

[ae/81791e] Submitted process > thermofilerawparser (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[ef/d9d859] Submitted process > calc_peptide_area_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[31/72818c] Submitted process > correctMzml (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[be/0cadef] Submitted process > shotgun_qc4l_hcd (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[71/776799] Submitted process > shotgun_qc4l_etcid (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[b5/b18db9] Submitted process > shotgun_qc4l_cid (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[37/29f6f4] Submitted process > shotgun_qc4l_ethcd (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
[9c/6ea711] Submitted process > calc_mass_accuracy_c4l_fake (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[3f/23974f] Submitted process > calc_tot_num_uniq_proteins (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[43/2533ba] Submitted process > calc_median_IT_MS2 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[9e/4df53e] Submitted process > check_mzML (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid)
[e0/5ccc18] Submitted process > calc_MS2_spectral_count (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[92/7d031a] Submitted process > calc_tot_num_psm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[a2/4661a2] Submitted process > calc_tot_num_uniq_peptides (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[07/dc5dee] Submitted process > calc_tic (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[5e/a5908e] Submitted process > calc_retTime_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[a4/6cd055] Submitted process > calc_median_IT_MS1 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[32/5b0cac] Submitted process > calc_median_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid-shotgun_qc4l_etcid)
[37/fe9689] Submitted process > calc_mass_accuracy_c4l_fake (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[32/5d01e5] Submitted process > calc_MS2_spectral_count (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[4b/106112] Submitted process > calc_tot_num_uniq_proteins (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[d8/9c1b13] Submitted process > calc_median_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[b5/802323] Submitted process > calc_median_IT_MS2 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[58/9de033] Submitted process > calc_retTime_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[76/f86e9d] Submitted process > calc_median_IT_MS1 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[d1/6a0b88] Submitted process > calc_tot_num_psm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[08/caed90] Submitted process > check_mzML (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd)
[51/1a0b0a] Submitted process > calc_tic (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[c4/364a4d] Submitted process > calc_tot_num_uniq_peptides (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd-shotgun_qc4l_ethcd)
[44/aff8ee] Submitted process > check_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_etcid)
[a4/c68d91] Submitted process > calc_tic (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[13/9b64d5] Submitted process > calc_tot_num_psm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[d6/a7f08a] Submitted process > calc_tot_num_uniq_proteins (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[5b/ff8c87] Submitted process > calc_MS2_spectral_count (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[ab/e57124] Submitted process > calc_tot_num_uniq_peptides (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[2f/d03906] Submitted process > calc_median_IT_MS1 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[3e/246179] Submitted process > calc_median_IT_MS2 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[5e/9a372b] Submitted process > calc_mass_accuracy_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[5a/39cfc4] Submitted process > calc_median_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[6b/06ca8e] Submitted process > check_mzML (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd)
[93/3cd165] Submitted process > calc_retTime_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd-shotgun_qc4l_hcd)
[ab/b8723d] Submitted process > check_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_ethcd)
[3f/fd4fd5] Submitted process > calc_MS2_spectral_count (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[01/7318b7] Submitted process > calc_mass_accuracy_c4l_fake (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[26/9ab6e7] Submitted process > calc_tot_num_uniq_proteins (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[77/90c5b0] Submitted process > calc_tic (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[c3/2f4d44] Submitted process > calc_median_IT_MS1 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[8f/e5dbcb] Submitted process > calc_tot_num_psm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[b0/fe2d0f] Submitted process > calc_retTime_c4l (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[9e/41bc95] Submitted process > check_mzML (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid)
[10/21dcf9] Submitted process > calc_median_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[2a/f166b8] Submitted process > calc_median_IT_MS2 (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[c0/3fb999] Submitted process > calc_tot_num_uniq_peptides (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid-shotgun_qc4l_cid)
[ab/eb838a] Submitted process > check_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_hcd)
[ad/a73b5c] Submitted process > check_fwhm (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c_cid)
[c7/d25d6b] Submitted process > sendToDB (7d1adc32-1a73-4ced-ad59-bdf55f89ba84_QC03_f8c358b465c88bdfab98765412f2103c)
rolivella commented 3 years ago

Inserted in wrong chronological order!