See how much it helps to recalculate a logprob if it's for different kbounds

psathyrella / partis

B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction

GNU General Public License v3.0

55 stars 34 forks source link

Closed psathyrella closed 8 years ago

matsen commented 8 years ago

kbounds = bounds of how much we allow deletion in our HMM.

Each sequence has a set of kbounds, and one needs to take the tightest range containing them all when we merge.

psathyrella commented 8 years ago

oh, screw it, I think this is fine the way it is now.