Closed darth-donut closed 6 years ago
arg, sorry about that. That's happened a couple of times, and has been hard to track down since it usually depends on the whole sample. But in this case, it seems I finally stamped the bug out a week or two ago, since I get that ^ error running on your sequence on master, but not on dev. So I'll merge dev into master now, and you can either wait for that or just pull from dev now.
That solved it, thanks!
Hi, I'm running partis on a sample size of approx 18k sequences, and I've encountered this exception:
I have a similar issue when running this again on a different dataset, with a different read.
Here's the read that caused the exception:
And here's the command I used to run partis:
If it helps, the other read was:
(also sample size of ~18k)
I'm running partis version 0.14.0 and mafft v7.402.