psathyrella / selection-metric-comments

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Are you still interested in more real data? #4

Open scharch opened 4 years ago

scharch commented 4 years ago

If you think that MFI from a flow cytometry sort is a reasonable enough proxy for binding affinity, you might be interested in the data from https://www.cell.com/immunity/fulltext/S1074-7613(19)30294-8 (see eg Fig 3D). Let me know...

psathyrella commented 4 years ago

Hell yeah. Please.

scharch commented 4 years ago

Maybe Figure 7 in this preprint is useful?

psathyrella commented 4 years ago

ooh, great, thanks! I'll check it out.

We've also got two groups here that it looks like will soon be synthesizing sequences that we've picked out with aa-cdist (plus maybe a bit of aa-lbi), so fingers crossed we should have some actual prospective validation before too long.