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psipred / s4pred

A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
GNU General Public License v3.0
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Batch inference #5

Open elejota1 opened 5 months ago

elejota1 commented 5 months ago

I would like to perform batch inference. Can you please point me some resources or provide support for it? Thanks a lot

DanBuchan commented 5 months ago

What do you mean by "batch inference" that you want to make s4pred predictions over many individual protein sequences?

elejota1 commented 5 months ago

Yes! I would like to predict on multiple protein sequences at once as you describe in the "Batched Sequence Prediction" section of the readme.

DanBuchan commented 5 months ago

Our colleague is going to implement batch inference shortly. We'll update here once that is done.