psychoinformatics-de / datalad-hirni

DataLad extension for (semi-)automated, reproducible processing of (medical/neuro)imaging data
http://datalad.org
Other
5 stars 8 forks source link

hirni-spec2bids does not remove temporary folders #145

Open pvavra opened 4 years ago

pvavra commented 4 years ago

not sure why, but I'm left with temporary hirni-tmp-.. folders under .git when done converting to bids.

I am using datalad 0.12.rc4, but a quick git blame on utils.py doesn't show any changes under rmtree in the last year - rmtree is supposed to take care of that tmp-dir removal (cf line 143).

In case this is not reproducible for you, I can give access to my medusa folder & environment (python 3.6.9).

bpoldrack commented 4 years ago

I'll try to reproduce. But the conversion finished successful in your case?

pvavra commented 4 years ago

conversion seems to have worked fine.