psychoinformatics-de / datalad-hirni

DataLad extension for (semi-)automated, reproducible processing of (medical/neuro)imaging data
http://datalad.org
Other
5 stars 8 forks source link

DICOM import problem #163

Closed lsempf closed 3 years ago

lsempf commented 3 years ago

Hello!

I tried to import an MRI measurement with datalad hirni-import-dcm. The following error occurred:

datalad hirni-import-dcm --anon-subject 001 /subject_001/subject_001_dicomsorted_nr0001.tar subject_001 [INFO ] Creating a new annex repo at /sourcedata/subject_001/dicoms [INFO ] Adding content of the archive subject_001/_dicomsorted_nr0001.tar into annex <AnnexRepo path=/sourcedata/subject_001/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)> AnnexBatchCommandError: command 'addurl' Error, annex reported failure for addurl (url='dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200101/series_5_Lautst%C3%A4rketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020010110180192305602876&size=1785482'): {'command': 'addurl', 'note': 'from datalad-archives\nto subject_001/study_1_20200101/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020010110180192305602876', 'success': False, 'error-messages': [], 'file': 'subject_001/study_1_20200101/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020010110180192305602876'}

We suspect that it is a git annex bug. Other MRI measurements could be imported without errors.

Thanks for any help.

bpoldrack commented 3 years ago

Hello @lsempf,

there's nothing that strikes me as an incredibly obvious problem. At a first glance, I'd suspect that something went wrong with the umlaut encoding. When you say "other MRI measurements could be imported", does that include within-archive paths with an umlaut? I'll try to reproduce it, but the issue might be completely elsewhere, of course. If you have a chance to rerun that very command by adding -l 8 right after datalad, I'd be very interested in its output.

lsempf commented 3 years ago

Hi @bpoldrack,

thank you for your response! Since we added this particular measurement later, the other acquisitions didn’t have an 'umlaut'.

So, I tried this command: datalad -l 8 hirni-import-dcm --anon-subject 001 /subject_001/subject_001_dicomsorted_nr0001.tar subject_001

I got a lot of [DEBUG ] messages (see at the end) but the command ended with an error:

[DEBUG ] Cleaning up the cache for /subject_001/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar under /subject_001/dicoms/.git/datalad/tmp/archives/06238fc134 [DEBUG ] Cleaning up the stamp file for /subject_001/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar under /subject_001/dicoms/.git/datalad/tmp/archives/06238fc134.stamp AnnexBatchCommandError: command 'addurl' Error, annex reported failure for addurl (url='dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_5_Lautst%C3%A4rketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876&size=1785482'): {'command': 'addurl', 'note': 'from datalad-archives\nto subject_001/study_1_20200622/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876', 'success': False, 'error-messages': [], 'file': 'subject_001/study_1_20200622/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876'}

Here is the complete output:

[DEBUG ] Command line args 1st pass. Parsed: Namespace() Unparsed: ['hirni-import-dcm', '--anon-subject', '032', '/home/data/sfb_cuetarget/scratch/mini_helios/au70_3841/au70_3841_dicomsorted_nr6680.tar', 'au70_3841'] [DEBUG ] Discovering plugins [DEBUG ] Loading entrypoints [DEBUG ] Loading entrypoint webapp from datalad.extensions for docs building [DEBUG ] Building doc for <class 'datalad_webapp.WebApp'> [DEBUG ] Loaded entrypoint webapp [DEBUG ] Loading entrypoint neuroimaging from datalad.extensions for docs building [DEBUG ] Loaded entrypoint neuroimaging [DEBUG ] Loading entrypoint metalad from datalad.extensions for docs building [DEBUG ] Loaded entrypoint metalad [DEBUG ] Loading entrypoint hirni from datalad.extensions for docs building [DEBUG ] Loaded entrypoint hirni [DEBUG ] Loading entrypoint container from datalad.extensions for docs building [DEBUG ] Loaded entrypoint container [DEBUG ] Building doc for <class 'datalad.core.local.status.Status'> [DEBUG ] Building doc for <class 'datalad.core.local.save.Save'> [DEBUG ] Building doc for <class 'datalad.interface.annotate_paths.AnnotatePaths'> [DEBUG ] Building doc for <class 'datalad_metalad.dump.Dump'> [DEBUG ] Building doc for <class 'datalad_hirni.commands.spec4anything.Spec4Anything'> [DEBUG ] Building doc for <class 'datalad_hirni.commands.dicom2spec.Dicom2Spec'> [DEBUG ] Building doc for <class 'datalad_metalad.extract.Extract'> [DEBUG ] Building doc for <class 'datalad.core.local.diff.Diff'> [DEBUG ] Building doc for <class 'datalad_metalad.aggregate.Aggregate'> [DEBUG ] Building doc for <class 'datalad.interface.download_url.DownloadURL'> [DEBUG ] Building doc for <class 'datalad_hirni.commands.import_dicoms.ImportDicoms'> [DEBUG ] Parsing known args among ['/home/data/sfb_cuetarget/env/datalad_12_5/bin/datalad', '-l', '8', 'hirni-import-dcm', '--anon-subject', '032', '/home/data/sfb_cuetarget/scratch/mini_helios/au70_3841/au70_3841_dicomsorted_nr6680.tar', 'au70_3841'] [Level 9] Running: ['git', '--git-dir=', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', '--git-dir=', 'config', '-z', '-l', '--show-origin'] with status 0 [DEBUG ] Determined class of decorated function: <class 'datalad_hirni.commands.import_dicoms.ImportDicoms'> [DEBUG ] Resolved dataset for import DICOM session: /home/data/sfb_cuetarget/sourcedata [Level 9] Running: ['git', '--git-dir=', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', '--git-dir=', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/.datalad/config'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/.datalad/config'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [DEBUG ] Discovering plugins [DEBUG ] Building doc for <class 'datalad.core.local.create.Create'> [DEBUG ] Found matching interface ('datalad.core.local.create', 'Create') for create [DEBUG ] Determined class of decorated function: <class 'datalad.core.local.create.Create'> [DEBUG ] Query status of <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)> for 1 paths [Level 9] Running: ['git', 'show', '-z', '--no-patch', '--format=%H', '--'] [Level 8] Finished running ['git', 'show', '-z', '--no-patch', '--format=%H', '--'] with status 0 [DEBUG ] <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [Level 8] Using existing Git repository at /home/data/sfb_cuetarget/sourcedata [Level 9] Running: ['git', 'config', '-z', '-l', '--file', '.gitmodules'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--file', '.gitmodules'] with status 0 [DEBUG ] <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [DEBUG ] Query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] [Level 9] Running: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] [Level 8] Finished running ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] [DEBUG ] Done <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [DEBUG ] Query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] [Level 9] Running: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '--', 'au70_3841/dicoms'] [Level 8] Finished running ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '--', 'au70_3841/dicoms'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard'] [DEBUG ] Done <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [Level 9] Running: ['git', 'ls-files', '-z', '-m', '--', 'au70_3841/dicoms'] [Level 8] Finished running ['git', 'ls-files', '-z', '-m', '--', 'au70_3841/dicoms'] with status 0 [DEBUG ] <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [DEBUG ] Query repo: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] [Level 9] Running: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l', '--', 'au70_3841/dicoms'] [Level 8] Finished running ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l', '--', 'au70_3841/dicoms'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] [DEBUG ] Done <GitRepo path=/home/data/sfb_cuetarget/sourcedata (<class 'datalad.support.gitrepo.GitRepo'>)>.get_content_info(...) [INFO ] Creating a new annex repo at /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms [DEBUG ] Initialize empty Git repository at '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms' [Level 9] Running: ['git', 'init'] [Level 8] Finished running ['git', 'init'] with status 0 [Level 9] Running: ['git', 'for-each-ref', '--format=%(refname:strip=2)', 'refs/heads', 'refs/remotes'] [Level 8] Finished running ['git', 'for-each-ref', '--format=%(refname:strip=2)', 'refs/heads', 'refs/remotes'] with status 0 [DEBUG ] Initializing annex repository at /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms... [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'for-each-ref', '--format=%(refname:strip=2)', 'refs/heads'] [Level 8] Finished running ['git', 'for-each-ref', '--format=%(refname:strip=2)', 'refs/heads'] with status 0 [Level 9] Running: ['git', 'annex', 'version', '--raw'] [Level 8] Finished running ['git', 'annex', 'version', '--raw'] with status 0 [Level 9] Running: ['git-annex', 'init', '-c', 'annex.dotfiles=true', '--debug'] [INFO ] [2020-10-06 12:27:26.714482017] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","show-ref","--hash","refs/heads/git-annex"] [INFO ] [2020-10-06 12:27:26.721636531] process done ExitFailure 1 [INFO ] [2020-10-06 12:27:26.721910589] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","show-ref","--verify","-q","origin/git-annex"] [INFO ] [2020-10-06 12:27:26.727599035] process done ExitFailure 1 [INFO ] [2020-10-06 12:27:26.739507266] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","write-tree"] [INFO ] [2020-10-06 12:27:26.824099147] process done ExitSuccess [INFO ] [2020-10-06 12:27:26.824286778] chat: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","commit-tree","4b825dc642cb6eb9a060e54bf8d69288fbee4904","--no-gpg-sign"] [INFO ] [2020-10-06 12:27:26.882277732] process done ExitSuccess [INFO ] [2020-10-06 12:27:26.882483741] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","update-ref","refs/heads/git-annex","d73cbc764d26deb280d07cae708d4f03f2fd6a97"] [INFO ] [2020-10-06 12:27:26.963224557] process done ExitSuccess [INFO ] [2020-10-06 12:27:26.998991134] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","config","annex.uuid","83f054ba-8e77-4c88-a3bb-714acc956bf1"] [INFO ] [2020-10-06 12:27:27.040822084] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.041053829] read: git ["config","--null","--list"] [INFO ] [2020-10-06 12:27:27.049473616] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.254458609] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","show-ref","git-annex"] [INFO ] [2020-10-06 12:27:27.264184415] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.264357372] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","show-ref","--hash","refs/heads/git-annex"] [INFO ] [2020-10-06 12:27:27.272377953] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.274055259] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","log","refs/heads/git-annex..d73cbc764d26deb280d07cae708d4f03f2fd6a97","--pretty=%H","-n1"] [INFO ] [2020-10-06 12:27:27.283125628] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.284409338] chat: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","cat-file","--batch"] [INFO ] [2020-10-06 12:27:27.285513686] chat: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","cat-file","--batch-check=%(objectname) %(objecttype) %(objectsize)"] [INFO ] [2020-10-06 12:27:27.292016824] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","config","annex.version","5"] [INFO ] [2020-10-06 12:27:27.33236521] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.332529557] read: git ["config","--null","--list"] [INFO ] [2020-10-06 12:27:27.341521639] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.341720642] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","symbolic-ref","-q","HEAD"] [INFO ] [2020-10-06 12:27:27.347458259] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.347949452] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","show-ref","refs/heads/master"] [INFO ] [2020-10-06 12:27:27.355106797] process done ExitFailure 1 [INFO ] [2020-10-06 12:27:27.355275203] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","symbolic-ref","-q","HEAD"] [INFO ] [2020-10-06 12:27:27.361396416] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.361544008] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","show-ref","--hash","refs/heads/master"] [INFO ] [2020-10-06 12:27:27.368257531] process done ExitFailure 1 [INFO ] [2020-10-06 12:27:27.368413223] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","checkout","-q","-B","master"] [INFO ] [2020-10-06 12:27:27.430956364] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.563365888] read: uname ["-n"] [INFO ] [2020-10-06 12:27:27.566845344] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.719818416] chat: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","hash-object","-w","--stdin-paths","--no-filters"] [INFO ] [2020-10-06 12:27:27.721540274] feed: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","update-index","-z","--index-info"] [INFO ] [2020-10-06 12:27:27.87251846] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.872743646] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","show-ref","--hash","refs/heads/git-annex"] [INFO ] [2020-10-06 12:27:27.880196406] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.881419659] read: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","write-tree"] [INFO ] [2020-10-06 12:27:27.964088006] process done ExitSuccess [INFO ] [2020-10-06 12:27:27.96426649] chat: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","commit-tree","308f75998081d3ccb0c3dd0c929888bab2ccfece","--no-gpg-sign","-p","refs/heads/git-annex"] [INFO ] [2020-10-06 12:27:28.022582796] process done ExitSuccess [INFO ] [2020-10-06 12:27:28.022770477] call: git ["--git-dir=.git","--work-tree=.","--literal-pathspecs","-c","annex.dotfiles=true","-c","annex.dotfiles=true","-c","annex.dotfiles=true","update-ref","refs/heads/git-annex","4ef5d1fd8f637a66a06f635cf2d783af0e414e6e"] [INFO ] [2020-10-06 12:27:28.064200292] process done ExitSuccess [INFO ] [2020-10-06 12:27:28.125062027] process done ExitSuccess [INFO ] [2020-10-06 12:27:28.126016009] process done ExitSuccess [INFO ] [2020-10-06 12:27:28.127373885] process done ExitSuccess [Level 8] Finished running ['git-annex', 'init', '-c', 'annex.dotfiles=true', '--debug'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'check-attr', '-z', '--all', '--', '.'] [Level 8] Finished running ['git', 'check-attr', '-z', '--all', '--', '.'] with status 0 [DEBUG ] Setting annex backend to MD5E (persistently) [Level 9] Running: ['git', 'config', '--local', 'annex.backends', 'MD5E'] [Level 8] Finished running ['git', 'config', '--local', 'annex.backends', 'MD5E'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', '-c', 'annex.largefiles=nothing', 'add', '--dry-run', '-N', '--ignore-missing', '--verbose', '--', '.gitattributes'] [Level 8] Finished running ['git', '-c', 'annex.largefiles=nothing', 'add', '--dry-run', '-N', '--ignore-missing', '--verbose', '--', '.gitattributes'] with status 0 [Level 9] Running: ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '-c', 'annex.largefiles=nothing', '--include-dotfiles', '--debug', '--', '.gitattributes'] [Level 8] Finished running ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '-c', 'annex.largefiles=nothing', '--include-dotfiles', '--debug', '--', '.gitattributes'] with status 0 [Level 9] Running: ['git', 'check-attr', '-z', '--all', '--', '.datalad/config', '.datalad/metadata/aggregate*', '.datalad/metadata/objects/*'] [Level 8] Finished running ['git', 'check-attr', '-z', '--all', '--', '.datalad/config', '.datalad/metadata/aggregate', '.datalad/metadata/objects/**'] with status 0 [Level 9] Running: ['git', 'check-attr', '-z', '--all', '--', '.git'] [Level 8] Finished running ['git', 'check-attr', '-z', '--all', '--', '.git'] with status 0 [Level 9] Running: ['git', 'config', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config', '--add', 'datalad.dataset.id', '891a2840-07be-11eb-997d-a0369f7c647e'] [Level 8] Finished running ['git', 'config', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config', '--add', 'datalad.dataset.id', '891a2840-07be-11eb-997d-a0369f7c647e'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', 'diff', '--name-only', '--staged'] [Level 8] Finished running ['git', 'diff', '--name-only', '--staged'] with status 0 [DEBUG ] <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [Level 8] Using existing Git repository at /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms [DEBUG ] Query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] [Level 9] Running: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o', '--', '.datalad'] [Level 8] Finished running ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o', '--', '.datalad'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] [DEBUG ] Done <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [DEBUG ] 2 path(s) to add to <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)> {'.gitattributes': {'type': 'file', 'state': 'untracked'}, '.datalad': {'type': 'directory', 'state': 'untracked'}} Total: 0%| | 0.00/59.0 [00:00<?, ?B/s][Level 9] Running: ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '--include-dotfiles', '-c', 'annex.largefiles=nothing', '--debug', '--', '.gitattributes', '.datalad'] Total (3 ok out of 2): 93%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████▊ | 55.0/59.0 [00:00<00:00, 694B/s][Level 8] Finished running ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '--include-dotfiles', '-c', 'annex.largefiles=nothing', '--debug', '--', '.gitattributes', '.datalad'] with status 0 [DEBUG ] Committing via direct call of git: ['git', 'commit', '-m', '[DATALAD] new dataset']
[Level 9] Running: ['git', 'commit', '-m', '[DATALAD] new dataset', '--', '.gitattributes', '.datalad'] [Level 8] Finished running ['git', 'commit', '-m', '[DATALAD] new dataset', '--', '.gitattributes', '.datalad'] with status 0 [Level 9] Running: ['git', 'symbolic-ref', 'HEAD'] [Level 8] Finished running ['git', 'symbolic-ref', 'HEAD'] with status 0 [Level 9] Running: ['git', 'checkout', '-b', 'incoming'] [Level 8] Finished running ['git', 'checkout', '-b', 'incoming'] with status 0 [DEBUG ] Reloading config due to supposed working tree update [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git-annex', 'initremote', '-c', 'annex.dotfiles=true', 'datalad-archives', 'encryption=none', 'type=external', 'externaltype=datalad-archives', 'autoenable=true', 'uuid=c04eb54b-4b4e-5755-8436-866b043170fa', '--debug'] [Level 8] Finished running ['git-annex', 'initremote', '-c', 'annex.dotfiles=true', 'datalad-archives', 'encryption=none', 'type=external', 'externaltype=datalad-archives', 'autoenable=true', 'uuid=c04eb54b-4b4e-5755-8436-866b043170fa', '--debug'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [Level 9] Running: ['git', '-c', 'annex.largefiles=nothing', 'add', '--dry-run', '-N', '--ignore-missing', '--verbose', '--', 'au70_3841_dicomsorted_nr6680.tar'] [Level 8] Finished running ['git', '-c', 'annex.largefiles=nothing', 'add', '--dry-run', '-N', '--ignore-missing', '--verbose', '--', 'au70_3841_dicomsorted_nr6680.tar'] with status 0 [Level 9] Running: ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '--debug', '--', 'au70_3841_dicomsorted_nr6680.tar'] [Level 8] Finished running ['git-annex', 'add', '-c', 'annex.dotfiles=true', '--json', '--json-error-messages', '--debug', '--', 'au70_3841_dicomsorted_nr6680.tar'] with status 0 [DEBUG ] Committing via direct call of git: ['git', 'commit', '-m', 'Retrieved /home/data/sfb_cuetarget/scratch/mini_helios/au70_3841/au70_3841_dicomsorted_nr6680.tar'] [Level 9] Running: ['git', 'commit', '-m', 'Retrieved /home/data/sfb_cuetarget/scratch/mini_helios/au70_3841/au70_3841_dicomsorted_nr6680.tar'] [Level 8] Finished running ['git', 'commit', '-m', 'Retrieved /home/data/sfb_cuetarget/scratch/mini_helios/au70_3841/au70_3841_dicomsorted_nr6680.tar'] with status 0 [Level 9] Running: ['git', 'checkout', '--orphan', 'incoming-processed'] [Level 8] Finished running ['git', 'checkout', '--orphan', 'incoming-processed'] with status 0 [DEBUG ] Reloading config due to supposed working tree update [Level 9] Running: ['git', 'status', '--porcelain', '--untracked-files=normal', '--ignore-submodules=none'] [Level 8] Finished running ['git', 'status', '--porcelain', '--untracked-files=normal', '--ignore-submodules=none'] with status 0 [Level 9] Running: ['git', 'rm', '-f', '-r', '--', '.'] [Level 8] Finished running ['git', 'rm', '-f', '-r', '--', '.'] with status 0 [Level 9] Running: ['git', 'merge', '-s', 'ours', '--no-commit', 'incoming'] [Level 8] Finished running ['git', 'merge', '-s', 'ours', '--no-commit', 'incoming'] with status 0 [Level 9] Running: ['git', 'read-tree', '-m', '-u', 'incoming'] [Level 8] Finished running ['git', 'read-tree', '-m', '-u', 'incoming'] with status 0 [DEBUG ] Building doc for <class 'datalad.local.subdatasets.Subdatasets'> [DEBUG ] Building doc for <class 'datalad.core.distributed.clone.Clone'> [DEBUG ] Building doc for <class 'datalad.distribution.get.Get'> [DEBUG ] Building doc for <class 'datalad.distribution.install.Install'> [DEBUG ] Building doc for <class 'datalad.interface.save.Save'> [DEBUG ] Building doc for <class 'datalad.distribution.add.Add'> [DEBUG ] Building doc for <class 'datalad.distribution.publish.Publish'> [DEBUG ] Building doc for <class 'datalad.distribution.drop.Drop'> [DEBUG ] Building doc for <class 'datalad.distribution.uninstall.Uninstall'> [DEBUG ] Building doc for <class 'datalad.distribution.remove.Remove'> [DEBUG ] Building doc for <class 'datalad.distribution.update.Update'> [DEBUG ] Building doc for <class 'datalad.distribution.siblings.Siblings'> [DEBUG ] Building doc for <class 'datalad.distribution.create_sibling.CreateSibling'> [DEBUG ] Building doc for <class 'datalad.distribution.create_sibling_github.CreateSiblingGithub'> [DEBUG ] Building doc for <class 'datalad.distributed.create_sibling_gitlab.CreateSiblingGitlab'> [DEBUG ] Building doc for <class 'datalad.interface.unlock.Unlock'> [DEBUG ] Building doc for <class 'datalad.metadata.metadata.Metadata'> [DEBUG ] Building doc for <class 'datalad.metadata.search.Search'> [DEBUG ] Building doc for <class 'datalad.metadata.aggregate.AggregateMetaData'> [DEBUG ] Building doc for <class 'datalad.metadata.extract_metadata.ExtractMetadata'> [DEBUG ] Building doc for <class 'datalad.plugin.wtf.WTF'> [DEBUG ] Building doc for <class 'datalad.interface.test.Test'> [DEBUG ] Building doc for <class 'datalad.interface.ls.Ls'> [DEBUG ] Building doc for <class 'datalad.interface.clean.Clean'> [DEBUG ] Building doc for <class 'datalad.interface.add_archive_content.AddArchiveContent'> [DEBUG ] Building doc for <class 'datalad.core.local.run.Run'> [DEBUG ] Building doc for <class 'datalad.interface.rerun.Rerun'> [DEBUG ] Building doc for <class 'datalad.interface.run_procedure.RunProcedure'> [DEBUG ] Building doc for <class 'datalad.distribution.create_test_dataset.CreateTestDataset'> [DEBUG ] Building doc for <class 'datalad.support.sshrun.SSHRun'> [DEBUG ] Query status of <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)> for all paths [Level 9] Running: ['git', 'show', '-z', '--no-patch', '--format=%H', '--'] [Level 8] Finished running ['git', 'show', '-z', '--no-patch', '--format=%H', '--'] with status 0 [DEBUG ] <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [DEBUG ] Query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] [Level 9] Running: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] [Level 8] Finished running ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-files', '--stage', '-z', '-d', '-m', '--exclude-standard', '-o'] [DEBUG ] Done <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [Level 9] Running: ['git', 'ls-files', '-z', '-m'] [Level 8] Finished running ['git', 'ls-files', '-z', '-m'] with status 0 [DEBUG ] <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [DEBUG ] Query repo: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] [Level 9] Running: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] [Level 8] Finished running ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] with status 0 [DEBUG ] Done query repo: ['git', 'ls-tree', 'HEAD', '-z', '-r', '--full-tree', '-l'] [DEBUG ] Initiating a new process for BatchedCommand(cmd=['git', 'cat-file', '--batch'], output_proc=, path=<<'/home/data/sfb_cuetar...>>) [DEBUG ] Closing stdin of <subprocess.Popen object at 0x7fca9d2f47b8> and waiting process to finish [DEBUG ] Process <subprocess.Popen object at 0x7fca9d2f47b8> has finished [DEBUG ] Done <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)>.get_content_info(...) [Level 9] Running: ['git-annex', 'lookupkey', '-c', 'annex.dotfiles=true', '--debug', '--', 'au70_3841_dicomsorted_nr6680.tar'] [Level 8] Finished running ['git-annex', 'lookupkey', '-c', 'annex.dotfiles=true', '--debug', '--', 'au70_3841_dicomsorted_nr6680.tar'] with status 0 [Level 9] Running: ['git-annex', 'contentlocation', '-c', 'annex.dotfiles=true', 'MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar', '--debug'] [Level 8] Finished running ['git-annex', 'contentlocation', '-c', 'annex.dotfiles=true', 'MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar', '--debug'] with status 0 [INFO ] Adding content of the archive au70_3841_dicomsorted_nr6680.tar into annex <AnnexRepo path=/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms (<class 'datalad.support.annexrepo.AnnexRepo'>)> [Level 9] Running: ['7z'] [Level 8] Finished running ['7z'] with status 0 [DEBUG ] Not initiating existing cache for the archives under /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives [DEBUG ] Cached directory for archive /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar is 06238fc134 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin', '--file', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.datalad/config'] with status 0 [Level 9] Running: ['git', 'config', '-z', '-l', '--show-origin'] [Level 8] Finished running ['git', 'config', '-z', '-l', '--show-origin'] with status 0 [DEBUG ] Special remote datalad-archives already exists [DEBUG ] Acquiring a lock /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134.extract-lck [DEBUG ] Acquired? lock /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134.extract-lck: True [DEBUG ] Extracting /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar under /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134 [Level 9] Running: ['7z', 'x', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar'] [Level 8] Finished running ['7z', 'x', '/home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar'] with status 0 [DEBUG ] Releasing lock /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134.extract-lck [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528193201709 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528193201709&size=163134 and with options None [DEBUG ] Initiating a new process for BatchedAnnex(cmd=<<['git', 'annex', 'addu...>>, output_proc=, path=<<'/home/data/sfb_cuetar...>>) [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524826601648 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524826601648&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522591101583 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522591101583&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165218055801907 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165218055801907&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197192001499 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197192001499&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182455201262 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182455201262&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215445801841 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215445801841&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524021401619 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524021401619&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197268001504 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197268001504&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528033501699 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528033501699&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180723701234 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180723701234&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184296701305 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184296701305&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221587401955 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221587401955&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212334401809 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212334401809&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196785001476 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196785001476&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197419401514 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197419401514&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165172914401083 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165172914401083&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524414501635 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524414501635&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522995401598 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522995401598&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196921801484 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196921801484&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194214401438 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194214401438&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217979001903 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217979001903&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524985601657 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524985601657&size=163130 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182367001258 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182367001258&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178689301181 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178689301181&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221811201967 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221811201967&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194367601446 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194367601446&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196997801491 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196997801491&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217828401895 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217828401895&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196852601480 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196852601480&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165173156701095 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165173156701095&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222840701979 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222840701979&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016523855201611 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016523855201611&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180811701239 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180811701239&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165198269601540 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165198269601540&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221435401946 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221435401946&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184527101318 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184527101318&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180897301243 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165180897301243&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179608601221 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179608601221&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178520501157 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178520501157&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182273601254 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182273601254&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221735601963 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221735601963&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528343101717 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528343101717&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221368501942 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221368501942&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212263201805 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212263201805&size=163130 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178775501190 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178775501190&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193793001417 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193793001417&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215517701845 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215517701845&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215594201849 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215594201849&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194549301454 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194549301454&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522468901578 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522468901578&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165198526401550 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165198526401550&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178610701169 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178610701169&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524493701640 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524493701640&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178943501205 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178943501205&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197072501495 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197072501495&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222986201987 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222986201987&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529835901754 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529835901754&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197493701518 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197493701518&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179533201215 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179533201215&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221661501959 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221661501959&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182186301250 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182186301250&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212178501799 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212178501799&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215747701858 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215747701858&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524253601627 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524253601627&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222911001983 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222911001983&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528590601731 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528590601731&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221509101950 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221509101950&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221882101971 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221882101971&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522660201587 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522660201587&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193950301425 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193950301425&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182541001266 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182541001266&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178083301138 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178083301138&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165223056201991 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165223056201991&size=163142 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528665501735 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528665501735&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212411501815 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212411501815&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528117601705 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528117601705&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528501501725 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528501501725&size=163130 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524578501644 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524578501644&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194109501433 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194109501433&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212107601795 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212107601795&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197345601510 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197345601510&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215978701872 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215978701872&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184449501314 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184449501314&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016526835101677 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016526835101677&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184602101322 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184602101322&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215904101868 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215904101868&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193869201421 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165193869201421&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524906101652 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524906101652&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165174017001101 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165174017001101&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524335401631 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016524335401631&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165572527201997 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165572527201997&size=163142 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529990401764 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529990401764&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194463701450 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194463701450&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197909101531 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165197909101531&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528741001739 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528741001739&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165172998801087 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165172998801087&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184374801310 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184374801310&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016527951101695 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016527951101695&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194292301442 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194292301442&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165191501101402 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165191501101402&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522912701592 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016522912701592&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215827301864 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215827301864&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221299301938 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165221299301938&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178861401200 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165178861401200&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217904801899 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165217904801899&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165173070301091 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165173070301091&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185676401338 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185676401338&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212040801791 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165212040801791&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185854001344 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185854001344&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165218136701913 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165218136701913&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179683901225 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165179683901225&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194029401429 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165194029401429&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185931401348 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165185931401348&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528268401713 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528268401713&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182627701270 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182627701270&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196665401472 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165196665401472&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165211969601787 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165211969601787&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215673701854 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215673701854&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165187569801357 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165187569801357&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528418501721 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016528418501721&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184086701299 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165184086701299&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016526907501681 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016526907501681&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016525065701661 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016525065701661&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215374401837 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165215374401837&size=163140 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529916201759 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.202006221016529916201759&size=163134 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222776101975 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165222776101975&size=163136 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182713201274 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_1_AAHead_Scout/MR.1.3.12.2.1107.5.2.43.66017.2020062210165182713201274&size=163138 and with options None [DEBUG ] Adding /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/au70_3841/study_1_20200622/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876 to annex pointing to dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_5_Lautst%C3%A4rketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876&size=1785482 and with options None [DEBUG ] Closing stdin of <subprocess.Popen object at 0x7fca97daea20> and waiting process to finish [DEBUG ] Process <subprocess.Popen object at 0x7fca97daea20> has finished [DEBUG ] Cleaning up the cache for /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar under /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134 [DEBUG ] Cleaning up the stamp file for /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/annex/objects/G9/64/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar/MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar under /home/data/sfb_cuetarget/sourcedata/au70_3841/dicoms/.git/datalad/tmp/archives/06238fc134.stamp AnnexBatchCommandError: command 'addurl' Error, annex reported failure for addurl (url='dl+archive:MD5E-s2886256640--0b6a7b53982a09e98d1ad0ace2b95655.tar#path=au70_3841/study_1_20200622/series_5_Lautst%C3%A4rketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876&size=1785482'): {'command': 'addurl', 'note': 'from datalad-archives\nto au70_3841/study_1_20200622/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876', 'success': False, 'error-messages': [], 'file': 'au70_3841/study_1_20200622/series_5_Lautstärketest_Schichtfg.egal_SBRef/MR.1.3.12.2.1107.5.2.43.66017.2020062210180192305602876'}

bpoldrack commented 3 years ago

Thanks, @lsempf !

I tried to reproduce the issue, assuming it was caused by the umlaut, but failed. So, that doesn't appear to be the issue. I assume, I can't have the tarball to look into it for data protection reasons or is there a way to share it?

Edit:

An alternative could be to build (and possibly share) an archive that only contains the file in question (see error message) including its path as you have it in the original archive and try to import this. If - as I assume - the error persists and that would make this miniature archive shareable, I could have a closer look.

Since git-annex sadly doesn't correctly report the actual error message within its JSON response, I need to have the issue right in front of me, I guess. A remote session to look into it might be another way.

Otherwise we need to ping-pong in this issue, where I tell you what to execute and you report the output. That could turn into quite a hassle. If it's fine with you, we can take that road, of course.

bpoldrack commented 3 years ago

Update to keep the record in this issue: I tried to use your tarball and it worked just fine for me, using hirni in version 0.0.6 as well as the brandnew 0.0.7 So, this looks like an issue that's about your environment. Something like you are running out of space on disc and it's not properly reported.

bpoldrack commented 3 years ago

Ok, so turns out it's about the umlaut indeed, leading to /344 being written as part of the path/URL on this particular machine. Not actually an issue with datalad-hirni, thus - closing.