search

putmantime / CMOD.Django

CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code
12 stars 1 forks source link

All the wikidata annotations for genes have been deleted #27

Closed cmdcolin closed 6 years ago

cmdcolin commented 6 years ago

I am not sure if I am mistaken, but it appears that almost all data has been deleted that were dynamically loaded from wikidata and the SPARQL queries on jbrowse no longer any results (to be actually accurate, there is one gene on helicobacter still that has this entity link https://www.wikidata.org/wiki/Q21629632)

aside from this example many deletions appear to have taken place?

wondering what we should do

putmantime commented 6 years ago

Hi Colin, Working on it. The WD model has changed. I have tried to update the sparql query in the Wikidata plugin, then run setup.sh, then restarted and the changes aren’t updating. What am I missing? Tim

On Apr 1, 2018, at 7:33 PM, Colin Diesh notifications@github.com wrote:

I am not sure if I am mistaken, but it appears that almost all data has been deleted that were dynamically loaded from wikidata and the SPARQL queries on jbrowse no longer any results (to be actually accurate, there is one gene on helicobacter still that has this entity link https://www.wikidata.org/wiki/Q21629632 https://www.wikidata.org/wiki/Q21629632)

aside from this example many deletions appear to have taken place?

wondering what we should do

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/putmantime/CMOD.Django/issues/27, or mute the thread https://github.com/notifications/unsubscribe-auth/AK2oPgat1j2kyDahHUOsnOibjaWhul1qks5tkY4AgaJpZM4TDFAU.

cmdcolin commented 6 years ago

You may need to clear browser cache after making changes to the config to see the updates

putmantime commented 6 years ago

Ok thanks, I thought I was clearing the cache but didn't work until I totally disabled it. Production is fixed now. Thanks for headsup. Repo has changed to https://github.com/SuLab/WikiGenomes.org. I have some work to do to get everything in sync with production. Standby for those changes in the next few days

cmdcolin commented 6 years ago

Cool :) if possible maybe this repo can just be deleted or archived ? anyways good work!