Closed raghuramshankar closed 3 years ago
thanks for the bug report @raghuramshankar. Can you please post the version number of the pybamm, jax and jaxlib modules? i.e.
→ pip list | grep -E 'pybamm|jax|jaxlib'
jax 0.2.12
jaxlib 0.1.65
pybamm 0.4.0 /home/mrobins/git/PyBaMM
Hi,
Thank you for your response. Here are my library versions:
pip list | grep -E 'pybamm|jax|jaxlib'
jax 0.2.19
jaxlib 0.1.70+cuda111
pybamm 0.2.4.post3
I am aware that I am not using the latest version of pybamm
. I had some issues in installing the latest version of pybamm
and I have reported them in https://github.com/pybamm-team/PyBaMM/issues/1608 and https://github.com/pybamm-team/PyBaMM/issues/1470.
I checked the changelog and found that there were no changes or bug fixes for the jax_solver
since v0.2.4
. However, I wonder if not using the latest version might affect the jax
simulations.
I see, the setup.py
in pybamm version 0.2.4 listed the jax dependencies as
"jax>=0.1.68", "jaxlib>=0.1.47",
however they should have been pinned to the exact version we support. Try installing "jax=0.1.68" and "jaxlib=0.1.47" in your environment and hopefully this should fix it.
i.e.
pip install -Iv jax==1.1.68
Hi,
It seems like only jaxlib>=0.1.60
is available to be installed via pip
. Here is the error I got:
pip install -Iv jaxlib==0.1.47
Using pip 21.1.3 from /home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip (python 3.9)
Non-user install because user site-packages disabled
Created temporary directory: /tmp/pip-ephem-wheel-cache-4y2oaj1z
Created temporary directory: /tmp/pip-req-tracker-ppu80go8
Initialized build tracking at /tmp/pip-req-tracker-ppu80go8
Created build tracker: /tmp/pip-req-tracker-ppu80go8
Entered build tracker: /tmp/pip-req-tracker-ppu80go8
Created temporary directory: /tmp/pip-install-3zjwzvyc
1 location(s) to search for versions of jaxlib:
* https://pypi.org/simple/jaxlib/
Fetching project page and analyzing links: https://pypi.org/simple/jaxlib/
Getting page https://pypi.org/simple/jaxlib/
Found index url https://pypi.org/simple
Looking up "https://pypi.org/simple/jaxlib/" in the cache
Request header has "max_age" as 0, cache bypassed
Starting new HTTPS connection (1): pypi.org:443
https://pypi.org:443 "GET /simple/jaxlib/ HTTP/1.1" 304 0
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Skipping link: not a file: https://pypi.org/simple/jaxlib/
Given no hashes to check 0 links for project 'jaxlib': discarding no candidates
ERROR: Could not find a version that satisfies the requirement jaxlib==0.1.47 (from versions: 0.1.60, 0.1.61, 0.1.62, 0.1.63, 0.1.64, 0.1.65, 0.1.66, 0.1.67, 0.1.68, 0.1.69, 0.1.70, 0.1.71)
ERROR: No matching distribution found for jaxlib==0.1.47
Exception information:
Traceback (most recent call last):
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 341, in resolve
name, crit = self._merge_into_criterion(r, parent=None)
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _merge_into_criterion
raise RequirementsConflicted(criterion)
pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('jaxlib==0.1.47')
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 127, in resolve
result = self._result = resolver.resolve(
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 473, in resolve
state = resolution.resolve(requirements, max_rounds=max_rounds)
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 343, in resolve
raise ResolutionImpossible(e.criterion.information)
pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('jaxlib==0.1.47'), parent=None)]
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
status = self.run(options, args)
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
return func(self, options, args)
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_internal/commands/install.py", line 318, in run
requirement_set = resolver.resolve(
File "/home/raghurams/repos/optimal-battery-charging/venv/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 136, in resolve
raise error from e
pip._internal.exceptions.DistributionNotFound: No matching distribution found for jaxlib==0.1.47
hmmm, you are right, looks like they have removed the old versions of jaxlib
. If you really want to use the jax solver, I think you'll have to upgrade to a newer pybamm version. The newer version is not yet on pypi, so you can clone this repository and install it that way. Follow the developer documentation here: https://pybamm.readthedocs.io/en/latest/install/GNU-linux.html#developer-install
Hi,
Thanks. I was able to install the developer version and the latest jax
and jaxlib
versions (with gpu) and it seems to be working with some models now.
Describe the bug Using Jax solver throws an error.
To Reproduce Minimal reproduce-able example:
Output:
Expected behaviour Should be able to solve the experiment using
jax
solver. I read thepybamm
documentation and saw that the extra codemodel.convert_to_format = 'jax'
is necessary while usingjax
solver. Tried searching a lot but not sure if more code is required for the same.