Closed dependabot[bot] closed 5 months ago
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======================================================================
ERROR: test_args_raised (atomic.structure.test_pyxtal.TestPyxtal)
pyxtal should raise appropriate errors when called with wrong arguments
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/runner/work/pyiron_atomistics/pyiron_atomistics/tests/atomic/structure/test_pyxtal.py", line 12, in test_args_raised
pyxtal(1, species=['Fe'], num_ions=[1,2])
File "/home/runner/work/pyiron_atomistics/pyiron_atomistics/pyiron_atomistics/atomistics/structure/pyxtal.py", line 65, in pyxtal
ret = _pyxtal(
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/structuretoolkit/build/random.py", line 56, in pyxtal
from pyxtal import pyxtal as _pyxtal
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/pyxtal/__init__.py", line 13, in <module>
from pymatgen.core.structure import Structure, Molecule
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/pymatgen/core/__init__.py", line 12, in <module>
from pymatgen.core.composition import Composition
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/pymatgen/core/composition.py", line 22, in <module>
from pymatgen.core.periodic_table import DummySpecies, Element, ElementType, Species, get_el_sp
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/pymatgen/core/periodic_table.py", line 39, in <module>
class ElementBase(Enum):
File "/usr/share/miniconda3/envs/my-env/lib/python3.9/site-packages/pymatgen/core/periodic_table.py", line 700, in ElementBase
@deprecated(
TypeError: deprecated() got an unexpected keyword argument 'deadline'
Bumps scipy from 1.13.0 to 1.13.1.
Release notes
Sourced from scipy's releases.
Commits
44e4eba
REL: SciPy 1.13.1 release commit [wheel build]2eb8e1b
Merge pull request #20632 from tylerjereddy/treddy_prep_1_13_1_backports1a00d48
DOC: PR 20632 updates11e99ba
BUG: stats: Fixzipf.pmf
andzipfian.pmf
for int32k
(#20702) [wheel bu...506cbeb
MAINT: stats.wilcoxon: fix bug with Ndim>1, shape[axis]>50, NaN, 'auto' (#20592)c9d8613
CI, MAINT: PR 20632 revisions95c50a4
MAINT: PR 20632 revisions [wheel build]e7abaf1
MAINT: PR 20632 revisions [wheel build]aa32933
CI: PR 20632 revisions [wheel build]023b0fb
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