pykao / BraTS2018-tumor-segmentation

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.
https://www.researchgate.net/publication/326549702_Brain_Tumor_Segmentation_and_Tractographic_Feature_Extraction_from_Structural_MR_Images_for_Overall_Survival_Prediction?_sg=Omb1yK0vXPLUJ0Xx70tsfv1nTplmWLNvrZExSDIVnyVDNm3CLLGwEgUB7qjJ-MrwC6VqUvoNt-kPdQ.2
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having floods of errors while running the command pip install git+https://github.com/thuyen/multicrop.git. #3

Closed saruarlive closed 4 years ago

saruarlive commented 4 years ago

Hi All,

I am having floods of errors while running the command

pip install git+https://github.com/thuyen/multicrop.git.

I am having Cuda 10.2 and Torch Cuda version is 1.5.0.

Any suggestion on how to run the repository without errors

pykao commented 4 years ago

Hello Saruarlive,

I forgot the Cuda version I used in this project. But you are able to use our model through our docker hub:

https://hub.docker.com/r/pykao/brats2018/

Best, pykao