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numpy no-member errors in test suite #4877

Closed bnavigator closed 3 years ago

bnavigator commented 3 years ago

Bug description

Running the test suite for 2.9.6 or the main branch results in test failures for Python 3.8 and Python 3.9 (but not for Python 3.6)

Configuration

No response

Command used

pytest --benchmark-disable

Pylint output

[  162s] =================================== FAILURES ===================================
[  162s] _________________________ test_functional[len_checks] __________________________
[  162s] 
[  162s] self = <pylint.testutils.lint_module_test.LintModuleTest object at 0x7fb71e69bc70>
[  162s] 
[  162s]     def runTest(self):
[  162s] >       self._runTest()
[  162s] E       AssertionError: Wrong results for file "len_checks":
[  162s] E       
[  162s] E       Unexpected in testdata:
[  162s] E        134: no-member
[  162s] E       
[  162s] E       Actual pylint output for this file:
[  162s] E       OutputLine(symbol='len-as-condition', lineno=4, column='3', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=7, column='3', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=11, column='9', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=14, column='11', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=55, column='5', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=60, column='5', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=63, column='6', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=66, column='6', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=69, column='12', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=72, column='6', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=95, column='11', object='github_issue_1331_v2', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=98, column='11', object='github_issue_1331_v3', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=101, column='17', object='github_issue_1331_v4', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=103, column='9', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=104, column='9', object='', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=124, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=125, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=126, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=127, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=128, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=129, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=130, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=134, column='18', object='github_issue_1879', msg="Module 'numpy' has no 'array' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='len-as-condition', lineno=171, column='11', object='github_issue_1879', msg='Do not use `len(SEQUENCE)` without comparison to determine if a sequence is empty', confidence='HIGH')
[  162s] E       OutputLine(symbol='undefined-variable', lineno=183, column='11', object='github_issue_4215', msg="Undefined variable 'undefined_var'", confidence='HIGH')
[  162s] E       OutputLine(symbol='undefined-variable', lineno=185, column='11', object='github_issue_4215', msg="Undefined variable 'undefined_var2'", confidence='HIGH')
[  162s] 
[  162s] ../../BUILDROOT/python-pylint-3.0.0~dev0-0.x86_64/usr/lib/python3.9/site-packages/pylint/testutils/lint_module_test.py:80: AssertionError
[  162s] ____________________ test_functional[nan_comparison_check] _____________________
[  162s] 
[  162s] self = <pylint.testutils.lint_module_test.LintModuleTest object at 0x7fb71d741220>
[  162s] 
[  162s]     def runTest(self):
[  162s] >       self._runTest()
[  162s] E       AssertionError: Wrong results for file "nan_comparison_check":
[  162s] E       
[  162s] E       Unexpected in testdata:
[  162s] E          6: no-member
[  162s] E          7: no-member
[  162s] E          9: no-member
[  162s] E         12: no-member
[  162s] E         13: no-member
[  162s] E         15: no-member
[  162s] E         17: no-member
[  162s] E         19: no-member
[  162s] E         21: no-member
[  162s] E       
[  162s] E       Actual pylint output for this file:
[  162s] E       OutputLine(symbol='nan-comparison', lineno=6, column='4', object='', msg="Comparison 'x is numpy.NaN' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=6, column='9', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=7, column='4', object='', msg="Comparison 'x == numpy.NaN' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=7, column='9', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=8, column='4', object='', msg="Comparison 'x == float('nan')' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=9, column='4', object='', msg="Comparison 'numpy.NaN == numpy.NaN' should be 'math.isnan(numpy.NaN)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=9, column='4', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='no-member', lineno=9, column='17', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=12, column='4', object='', msg="Comparison 'numpy.NaN is not x' should be 'not math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=12, column='4', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=13, column='4', object='', msg="Comparison 'numpy.NaN != x' should be 'not math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=13, column='4', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=15, column='4', object='', msg="Comparison 'x != numpy.NaN' should be 'not math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=15, column='9', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=16, column='5', object='', msg="Comparison 'x != float('nan')' should be 'not math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=17, column='7', object='', msg="Comparison 'x == numpy.NaN' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=17, column='12', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=18, column='7', object='', msg="Comparison 'x is not float('nan')' should be 'not math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=19, column='3', object='', msg="Comparison 'x == numpy.NaN' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=19, column='8', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] E       OutputLine(symbol='nan-comparison', lineno=21, column='9', object='', msg="Comparison 'x is numpy.NaN' should be 'math.isnan(x)'", confidence='HIGH')
[  162s] E       OutputLine(symbol='no-member', lineno=21, column='14', object='', msg="Module 'numpy' has no 'NaN' member", confidence='INFERENCE')
[  162s] 
[  162s] ../../BUILDROOT/python-pylint-3.0.0~dev0-0.x86_64/usr/lib/python3.9/site-packages/pylint/testutils/lint_module_test.py:80: AssertionError

Expected behavior

successful test suite

Pylint version

pylint 2.9.6 with patch #4816 OR pylint main branch astroid 2.7.1

OS / Environment

openSUSE Tumbleweed build environment

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Pierre-Sassoulas commented 3 years ago

Thank you for opening the issue. I don't see your version of numpy in the dependency, is that normal ? The error seems to be about numpy.

bnavigator commented 3 years ago

Numpy is not installed in the build environment. I don't see it in your test requirements either.

bnavigator commented 3 years ago

There must have been some cache involved. When I build in a pristine VM (osc build --clean) everything builds fine.

I just noticed the same behavior in astroid.