pymc-devs / pymc-examples

Examples of PyMC models, including a library of Jupyter notebooks.
https://www.pymc.io/projects/examples/en/latest/
MIT License
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Geostatistical data analysis with HSGP #684

Open Dekermanjian opened 2 months ago

Dekermanjian commented 2 months ago

Notebook proposal

Title: Estimating the prevalence of malaria in the Gambia

Why should this notebook be added to pymc-examples?

This example illustrates the usage of HSGP on geostatistical data to produce out-of-sample estimates of malaria prevalence in surrounding geographical areas

Suggested categories:

Related notebooks

A lot of the ground work is covered here: https://gist.github.com/Dekermanjian/5a6085e69532d6f92ca614f6d7a6b3b6

References

This work is a port from R's INLA-SPDE found here: https://www.paulamoraga.com/book-geospatial/sec-geostatisticaldataexamplespatial.html

I am actively working on this example and plan to have a draft ready by Aug 4, 2024. @bwengals Tagging you here.