pyplati / platipy

Processing Library and Analysis Toolkit for Medical Imaging in Python
https://pyplati.github.io/platipy/
Apache License 2.0
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TCIA downloader with example #47

Closed pchlap closed 3 years ago

pchlap commented 3 years ago

Hey @rnfinnegan,

I've cleaned up the code to download from TCIA. It also (can) convert to NIFTI, which uses the process_dicom_directory function. So I've made a few small changes to that so that it returns a dictionary of the files which were created. No doubt we can refine this but as you can see in the example notebook it is working for now :)

Note that Ive also regenerated the docs in this pull requests, so thats why there are so many files changed.

Happy to chat this over on Tuesday if you like :)