Closed msto closed 4 months ago
These were added while the type hints PR #1008 was still in flight. So it is more that the latter was (understandably) not updated with additions on master before it was itself merged.
In any case, thanks for the useful contribution. I've checked for other additions while the type hints were gestating — there were two, and I've added type stubs for them to your branch.
Thanks @jmarshall !
https://github.com/pysam-developers/pysam/pull/1088 added
is_mapped
andis_forward
(and their mate equivalents) to theAlignedSegment
API, but didn't declare these properties in the corresponding type stubs. Their absence here causes downstream woes with mypy's type checking