Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
Hi, I`m installing anvio following this tutorial https://anvio.org/install/linux/stable/. Everything goes smoothly to the end of step 4 with no errors but when I run anvi-self-test --suite mini, it gives me an error of ImportError: liblzma-51a76f52.so.5.2.4: cannot open shared object file: No such file or directory. I checked in miniconda lib and found that I have a different version of liblzma.so.5.4.6.
How can I fix this problem?
Hi, I`m installing anvio following this tutorial https://anvio.org/install/linux/stable/. Everything goes smoothly to the end of step 4 with no errors but when I run anvi-self-test --suite mini, it gives me an error of ImportError: liblzma-51a76f52.so.5.2.4: cannot open shared object file: No such file or directory. I checked in miniconda lib and found that I have a different version of liblzma.so.5.4.6. How can I fix this problem?