Candidates to be integrated into the semantic-python-overview list

cknoll commented 2 years ago

This issue serves as place to note candidate projects (via url), which might be added to the list.

Update (2022-01-29): I initially planned to use this issue as a public place to note down candidates to add them by later myself. Now, I try to ping people involved in those projects. Benefits:

Information added is more accurate
People get to know of this list
Saves time for me

Update: (2022-02-04): The recent activity in this repository (forks and pull requests seem to had effects on githubs recommendation algorithm: the number of stars rose from ≈25 to ≈250 in about 48h and keeps rising). This is exactly the the intention of this repo and https://pysemtec.org in general: to generate attention and publicity for python-based semantic-technology tools.

cknoll commented 2 years ago

https://github.com/oeg-dataintegration/owl2rml

cknoll commented 2 years ago

[ ] https://github.com/tgbugs/pyontutils should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe the maintainer @tgbugs could open a PR.

cknoll commented 2 years ago

[x] https://github.com/OnToology/OnToology should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the recent contributors (@mariapoveda @dgarijo @ahmad88me) could open a PR.

cknoll commented 2 years ago

[ ] https://github.com/usc-isi-i2/ontology-visualization should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @fatestigma could open a PR.

cknoll commented 2 years ago

[x] https://github.com/dhimmel/obonet should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@dhimmel @arvkevi @cmungall @torstees @cthoyt) could open a PR.

dgarijo commented 2 years ago

@cknoll I am happy to have OnToology as part of the list. Please feel free to integrate it if you want. We already added some of these tools in https://github.com/semantalytics/awesome-semantic-web

cknoll commented 2 years ago

@dgarijo done, see https://github.com/pysemtec/semantic-python-overview/commit/c4883391a4499e614b79a31f8635c72fec908297. Feel free to improve the entry or add other projects.

dgarijo commented 2 years ago

Thanks!

dhimmel commented 2 years ago

https://github.com/dhimmel/obonet should be integrated

Opened https://github.com/pysemtec/semantic-python-overview/pull/10 to add obonet and nxontology, which is a more general purpose successor I've been working on.

cthoyt commented 2 years ago

Pinging @althonos who probably will have somthing to add (e.g., pronto)

dhimmel commented 2 years ago

will have somthing to add (e.g., pronto)

Pronto already added by https://github.com/pysemtec/semantic-python-overview/commit/33b5a7a10b84969a4df440902c4c6ad2e6b13c6c

cknoll commented 2 years ago

[ ] https://github.com/AKSW/owlapy should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@SimonBin @LukasBluebaum @Demirrr) could open a PR.

Update: link to docs: https://owlapy-docs.netlify.app/, see https://github.com/AKSW/owlapy/issues/5#issuecomment-1064159527

cknoll commented 2 years ago

[x] https://github.com/paulhoule/gastrodon should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@paulhoule @jhadjar) could open a PR.

cknoll commented 2 years ago

[x] https://github.com/DerwenAI/kglab should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @ceteri @louisguitton @Ankush-Chander @Mec-iS @tomaarsen) could open a PR.

cknoll commented 2 years ago

[ ] https://github.com/franzinc/agraph-python and maybe https://github.com/franzinc/agraph-examples should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @dklayer @KenCheetham) could open a PR.

The reasoning docs seem especially interesting: https://franz.com/agraph/support/documentation/current/python/tutorial/example020.html.

ceteri commented 2 years ago

Thank you @cknoll, I've just added a PR for kglab

You may also want to check the list we've been curating of "Similar Projects": https://derwen.ai/docs/kgl/ack/#similar-projects

Also, we'll make links back into https://github.com/pysemtec/semantic-python-overview

cknoll commented 2 years ago

[ ] https://github.com/libris/definitions should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @niklasl @klngwll @sarwik @oBlissing @olovy) could open a PR.

cknoll commented 2 years ago

[ ] https://github.com/ozekik/lightrdf should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @ozekik could open a PR.

WolfgangFahl commented 2 years ago

Carsten - thanks for getting in touch and letting me know about the list: https://github.com/WolfgangFahl/pyLoDStorage is a candidate - it is a library that allows to works with python native list of dicts in a tabular way and interchange data this way between JSON, Relational Data and SPARQL. There is also a Query and Querymanager concept which allows to specify named queries. The tabulate library is intergrated so that results can be immediately shown not only as JSON, CSV, TSV and XML (which are natively supported by the SPARQL protocol) but also as e.g. latex, mediawiki or github markup.

The current list of default queries is shown below

sparqlquery --list
Predicate usage:Predicate usage
Predicate usage grouped by source:Predicate usage grouped by source
Conference Series:Scientific conference series
US President Nicknames:Nick names of US Presidents
cities:German cities by population
FirstTriple:First Triple

The result of e.g.

sparqlquery -qn "US President Nicknames" -f github

can be cut& paste directly here (see below). I have cheated a bit by improving the "try it!" result - currently the full query is not shown automatically yet - i had to actually enter it in the query service and then paste the url below.

Nick names of US Presidents

https://stackoverflow.com/questions/70206791/sparql-i-have-individual-with-multiple-values-for-single-object-property-how

query

SELECT ?president ?presidentLabel (GROUP_CONCAT(DISTINCT ?nickName; SEPARATOR=",") as ?nickNames)
WHERE 
{
  # president
  ?president wdt:P39 wd:Q11696.
  # nickname
  ?president wdt:P1449 ?nickName
  SERVICE wikibase:label { bd:serviceParam wikibase:language "en". }
} GROUP BY ?president ?presidentLabel

try it!

result

president	presidentLabel	nickNames
Q23	George Washington	American Fabius
Q76	Barack Obama	Barry
Q1124	Bill Clinton	The Comeback Kid,Slick Willie
Q6279	Joe Biden	Joe
Q9588	Richard Nixon	Dick Nixon
Q9696	John F. Kennedy	Jack
Q9916	Dwight D. Eisenhower	Ike
Q11817	Andrew Jackson	Old Hickory
Q11820	Martin Van Buren	Old Kinderhook
Q11869	William Henry Harrison	Old Tippecanoe
Q11896	Zachary Taylor	Old Rough and Ready
Q22686	Donald Trump	The Donald
Q33866	Theodore Roosevelt	Teddy
Q34836	Ulysses S Grant	“Unconditional Surrender” Grant

situx commented 2 years ago

Hi!

Thanks for curating this list. I maintain a QGIS plugin (https://github.com/sparqlunicorn/sparqlunicornGoesGIS) that allows to query (Geo)SPARQL endpoints to add vector layers in the QGIS software. Like most QGIS plugins it is also written in python and builds on top of RDFlib and pySHACL (https://github.com/RDFLib/pySHACL)

If that is of interest to your list I could issue a pull request with a short description.

cknoll commented 2 years ago

@situx

If that is of interest to your list I could issue a pull request with a short description.

This would be great!

cknoll commented 2 years ago

[ ] https://github.com/vemonet/rdflib-endpoint should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @vemonet could open a PR?

cknoll commented 2 years ago

[ ] https://github.com/dahlia/wikidata should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @dahlia could open a PR?

WolfgangFahl commented 2 years ago

https://hongminhee.org/ doesn't mention the project in his own list ... strange

cknoll commented 2 years ago

[ ] https://github.com/samuelmeuli/python-wikibase and https://github.com/samuelmeuli/wikibase-api should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @samuelmeuli could open a PR?

cknoll commented 2 years ago

[ ] https://github.com/MNoorFawi/pytholog should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @MNoorFawi could open a PR?

Murplugg commented 2 years ago

Perhaps OWL2Vec*: embedding of OWL ontologies should be integrated.

Repo: https://github.com/KRR-Oxford/OWL2Vec-Star Paper: https://openaccess.city.ac.uk/id/eprint/25129/8/Chen2021_Article_OWL2VecEmbeddingOfOWLOntologie.pdf

cknoll commented 2 years ago

Good idea @Murplugg:

[ ] https://github.com/KRR-Oxford/OWL2Vec-Star should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the maintainers @ChenJiaoyan @ernestojimenezruiz could open a PR?

Reason: Maintainers can usually provide the best description of their project and usually are interested in increased visibility.

cknoll commented 1 year ago

[ ] evaluate https://github.com/semanticpy and the repos there

pysemtec / semantic-python-overview