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python-microscope / microscope

Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performance and flexibility.
https://www.python-microscope.org
GNU General Public License v3.0
71 stars 41 forks source link

support for lightsheet microscopes #41

Open carandraug opened 6 years ago

carandraug commented 6 years ago

Requested at ELMI 2018

Don't forget lightsheet microscopes.

carandraug commented 5 years ago

Two groups, interested in using microscope and cockpit, also for their lightsheet microscope (group in Champalimaud (LIsbon) and i3s (Porto)).

iandobbie commented 5 years ago

What does support for light sheet microscopes mean? Overall is there anything different from conventional systems? I guess the motion composting controls will need adaption but the hardware is very similar so someone just needs to build one!

Maybe we should try to get someone to build an OpenSPIM using microscope/cockpit.

Ian

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On 8 Nov 2019, at 11:43, Carnë Draug notifications@github.com wrote:



Two groups, interested in using microscope and cockpit, also for their lightsheet microscope (group in Champalimaud (LIsbon) and i3s (Porto)).

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carandraug commented 5 years ago

We need to sync galvos with the cameras (well, the galvos trigger the camera). Their stage does rotation too (on the cockpit side, I will open an issue for that there, the mosaic view does not make a lot of sense)

iandobbie commented 5 years ago

Galvo to camera timing would be an experiment on the hardware timing system.

The mosaic could become a secondary window but even in a light sheet an overview image can be useful.

Ian

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On 8 Nov 2019, at 12:29, Carnë Draug notifications@github.com wrote:



We need to sync galvos with the cameras (well, the galvos trigger the camera). Their stage does rotation too (on the cockpit side, I will open an issue for that there, the mosaic view does not make a lot of sense)

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carandraug commented 5 years ago

Christian Eggling also is interested on using this for a lightsheet microscope they plan on building.