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pyukman / genomic-cds

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Add support for further data import formats (e.g., VCF) #10

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
Currently only 23andMe-style data can be imported to generate MSCs. However, 
there are also other, more 'professional' standards. One of the most important 
is VCF. VCF can be quite complicated
http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-cal
l-format-version-41

However, we only need to recognize a subset of VCF expressivity, I guess. An 
importer for VCF data should be added.

Maybe this could be an inspiration: 
https://gist.github.com/gedankenstuecke/1824692
http://de.slideshare.net/JeremyJCarroll/vcf-and-rdf

Original issue reported on code.google.com by matthias...@gmail.com on 5 Aug 2013 at 10:05

GoogleCodeExporter commented 8 years ago

Original comment by jose.mi...@gmail.com on 16 Sep 2013 at 9:07