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pyxem / pyxem-demos

Examples and tutorials of multi-dimensional diffraction microscopy workflows using pyxem.
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Demo07 incompatible with pyxem0.13: get_azimuthal_integral #69

Closed zhang-siyuan closed 3 years ago

zhang-siyuan commented 3 years ago

Following the jupyter notebook until: integration2d = dp.get_azimuthal_integral2d(npt_rad=100, unit="pyxem")

  1. npt_rad is now npt
  2. after the easy fix integration2d = dp.get_azimuthal_integral2d(npt=100, unit="pyxem") would lead to: ValueError: ai property is not currently set

Same problem for get_azimuthal_integral1d

Suspect it has something to do with the lazy input, but the problem persists after changing dp.unit="2th_deg" or giving wavelength=2.5e-12 for dp.unit = "k_A^-1" (the unit in Demo7)

CSSFrancis commented 3 years ago

@zhang-siyuan thanks for bringing up this issue! I think the problem is just that the updated notebook never got merged.

You can use the notebook here https://github.com/pyxem/pyxem-demos/pull/63 in the meantime and I'll try to get it merged.

@pc494 any reason the demo can't be merged? I can look at it again tomorrow to make sure it still works.

pc494 commented 3 years ago

@pc494 any reason the demo can't be merged? I can look at it again tomorrow to make sure it still works.

Nothing more than my own inefficiency sadly. I had hoped to tidy up the syntax a little, but given that I haven't if you do go over it again I'll merge.

CSSFrancis commented 3 years ago

@pc494 This should be good to merge. I tested it the other day and it seems to work.

For the time being it should be good but I might try to get back to it and clean it up a little later

pc494 commented 3 years ago

The relevant PR is #63

pc494 commented 3 years ago

If somebody could check that #63 did indeed fix this that would be grand.

zhang-siyuan commented 3 years ago

@CSSFrancis Thank you so much! Your notebook provides a compatible solution and some very nice notes, highly appreciate! @pc494 Yes, the fix works perfectly for me.

pc494 commented 3 years ago

Great, I'll close the issue