[x] seq. GB 3 seq but... = txid1810948 in GenBank, but not well defined - many are marked as Nairobi sheep disease virus, with Taxonomy ID: 194540
L, 3 CG bis 99% (KU925464, HQ286601, EU697949) - one strain of Nairobi sheep disease orthonairovirus - specie. Next Nairobi 90%. Next not Nairobi - specie: 70%: Tofla, Hazara, Dubge, CCHFV, Kupe
M, 3 CG bis 99% (KU925465, HQ286599, EU697950), other 6 seq. bis 95%. Next Nairobi - 78%. Not Naironbi bis 69% : Tofla, Hazara, Dubge, CCHFV, Kupe
S, CG ~7 bis 94% (KU925466, HQ286602, AF504294, HQ286609, ). Next Nairobi - 90%. Next not Nairobi - specie: 76%: Tofla, Hazara, Dubge, CCHFV, Kupe
Bunyavirales - order (Phylum:Negarnaviricota; Subphylum:Polyploviricotina; Class:Ellioviricetes)
Nairoviridae - family
Orthonairovirus - genus
Nairobi sheep disease orthonairovirus - specie. Taxonomy ID: 194540. Important tick-borne pathogen of sheep and goats in Africa, also present in Asia
*** Ganjam virus - isolate (IP 4081, UG MP 5689) (Nairobi sheep disease orthonairovirus - specie)
our CCHF-qPCR CCHF-s_S-f Genome position: 1,068–1,095 CCHF-s_S-p Genome position: 1,172–1,198 CCHF-s_S-r Genome position: 1,223–1,248