qPCR4vir / ThDySec

Modeling of primers/probes hybridization on to a set of target viral sequences.

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qPCR for Dugbe (Nairoviridae - family: incl. CCHFV) #14

Open qPCR4vir opened 5 years ago

qPCR4vir commented 5 years ago

Bunyavirales - order (Phylum:Negarnaviricota; Subphylum:Polyploviricotina; Class:Ellioviricetes)

Nairoviridae - family

Orthonairovirus - genus

*** Dugbe orthonairovirus - specie (IB AR 1792, IB H 11480)

[x] seq. GB 99 seq.. BLAST: 20 L: 4>1000nt, bis 90%, Next 80% Kupe, 72% Hazara. 20 M, 2 CG, bis 87%, Next Nairobi 70%. 30 S, 8 CG, bis 90%. Next CCHFV 64%
[x] primers Literatur
[x] oligos
[x] primers, PCR
[ ] exp

*** Hazara orthonairovirus - specie. see #15

*** Nairobi sheep disease orthonairovirus - specie. #12

Crimean-Congo hemorrhagic fever orthonairovirus - specie. see #25