qbic-pipelines / querynator

MIT License
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use cancer type in civic #27

Closed HomoPolyethylen closed 1 month ago

HomoPolyethylen commented 2 months ago

Description of feature

CIViC evidence items contain disease field, relevant for the significance of the evidence item. Use this information to filter evidences based on the specified cancer type.

If there is a level A evidence for my variant V, but not my cancer type C, but a different one C_diff --> add level C evidence for V,C to civic results table.