Closed Waseju closed 1 year ago
To keep the code consistent with lots of contributors, we run automated code consistency checks. To fix this CI test, please run:
markdownlint-cli
brew install markdownlint-cli
npm
then install markdownlint-cli
(npm install -g markdownlint-cli
)markdownlint . --fix
markdownlint .
Once you push these changes the test should pass, and you can hide this comment :+1:
We highly recommend setting up markdownlint in your code editor so that this formatting is done automatically on save. Ask about it on Slack for help!
Thanks again for your contribution!
To keep the code consistent with lots of contributors, we run automated code consistency checks. To fix this CI test, please run:
yaml-lint
npm
then install yaml-lint
(npm install -g yaml-lint
)yamllint $(find . -type f -name "*.yml" -o -name "*.yaml")
Once you push these changes the test should pass, and you can hide this comment :+1:
We highly recommend setting up yaml-lint in your code editor so that this formatting is done automatically on save. Ask about it on Slack for help!
Thanks again for your contribution!
Hello, do we have any new developments here? So far the CI tests are not passing, also in the meantime there were multiple releases of nf-core tools so the template should probably be updated again
This issue is fixed: https://github.com/qbic-pipelines/root-tissue-analysis/issues/6
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit 68cab14
+| ✅ 126 tests passed |+
#| ❔ 22 tests were ignored |#
!| ❗ 17 tests had warnings |!
First fully working version of the root tissue analysis pipeline.