Bump core-utils-lib from 1.0.0 to 1.5.1

[dependabot-preview[bot]]

Bumps core-utils-lib from 1.0.0 to 1.5.1.

Release notes

Sourced from core-utils-lib's releases.

White Orchid

• Ignore the quality control folder for now
• Acquire the Oxford Nanopore instrument output schema from the data-model-lib
• Support unclassified folders, that hold read information with missing and/or unknown sample code to the experiment

Version 1.4.4

Validation errors of the Nanopore file structure are now reported to the log more verbosely.

Version 1.4.3

Functionality to parse Nanopore data structure

Minor release

• Adds support for QBiC services by introducing a ConsulServiceFactory that can be used to retrieve different service types from QBiC's service registry

Release 1.2.1

Add function to print elapsed time, given a starting time

Version 1.1.0

No release notes provided.

Changelog

Sourced from core-utils-lib's changelog.

Changelog for new releases

1.5.0

• Ignore the quality control folder for now
• Acquire the Oxford Nanopore instrument output schema from the data-model-lib
• Support unclassified folders, that hold read information with missing and/or unknown sample code to the experiment

1.4.4

• Validation errors of the Nanopore file structure are now reported to the log more verbosely.

1.4.3

• Provides functionality to parse Nanopore data structure

1.4.2

• Use data model lib version 1.8.2, which introduces an important bug fix

1.4.1

• Provide JAR with all dependencies included for single deployment (i.e. ETL dropboxes, etc.)

1.4.0

• Add a new static class NanoporeParser that is able to parse a Oxford Nanopore Machine data output and provide its content as a core data model of type OxfordNanoporeExperiment.class.

Commits

• See full diff in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) - `@dependabot use these labels` will set the current labels as the default for future PRs for this repo and language - `@dependabot use these reviewers` will set the current reviewers as the default for future PRs for this repo and language - `@dependabot use these assignees` will set the current assignees as the default for future PRs for this repo and language - `@dependabot use this milestone` will set the current milestone as the default for future PRs for this repo and language - `@dependabot badge me` will comment on this PR with code to add a "Dependabot enabled" badge to your readme Additionally, you can set the following in your Dependabot [dashboard](https://app.dependabot.com): - Update frequency (including time of day and day of week) - Pull request limits (per update run and/or open at any time) - Out-of-range updates (receive only lockfile updates, if desired) - Security updates (receive only security updates, if desired)

[dependabot-preview[bot]]

Superseded by #55.