Enable export of variants as FHIR/JSON

qbicsoftware / variantstore-service

The Variantstore is a Java/Groovy-based service application implemented using the Micronaut framework and enables storage and access to information on genomic variants and metadata from a connected database via a RESTful API.

MIT License

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Enable export of variants as FHIR/JSON #14

Closed christopher-mohr closed 4 years ago

christopher-mohr commented 4 years ago

We should add functionality to export Variants as FHIR/JSON from the Variantstore. This could be based on the following: VCF-2-FHIR

Before we start implementing this, we should be sure about the FHIR Scheme (could be based on this: http://hl7.org/fhir/uv/genomics-reporting/index.html).

christopher-mohr commented 4 years ago

Functionality for first version added by #25.