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QIIME, EMP and American Gut Web Application
www.microbio.me/qiime
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Enviromental Samples come up as missing info #678

Open teravest opened 10 years ago

teravest commented 10 years ago

If a sample is logged as environmental there is no survey, and it is showing up as missing metadata in the scan barcode app.
Barcode 000014570 is an example.

adamrp commented 10 years ago

I'll take this one. Have we been plating and sequencing environmental samples up to this point?

ackermag commented 10 years ago

The only environmental samples that I know of are from Mercola, Michael Pollan and this new sample.. gail

On Wed, Apr 16, 2014 at 11:53 AM, adamrp notifications@github.com wrote:

I'll take this one. Have we been plating and sequencing environmental samples up to this point?

— Reply to this email directly or view it on GitHubhttps://github.com/qiime/qiime_web_app/issues/678#issuecomment-40630443 .

Gail Ackermann Knight Lab UCB 596 University of Colorado Boulder

elainewolfe commented 10 years ago

I think some people have submitted some fermented food samples, which would categorize under environmental. I'll see if I can hunt them down.

ackermag commented 10 years ago

one is from Michael Pollan...kim chi

On Wed, Apr 16, 2014 at 7:54 PM, elainewolfe notifications@github.comwrote:

I think some people have submitted some fermented food samples, which would categorize under environmental. I'll see if I can hunt them down.

— Reply to this email directly or view it on GitHubhttps://github.com/qiime/qiime_web_app/issues/678#issuecomment-40672963 .

Gail Ackermann Knight Lab UCB 596 University of Colorado Boulder

adamrp commented 10 years ago

Oh. @teravest, to clarify, does it come up as missing metadata (pink error) or missing info (yellow error)?

teravest commented 10 years ago

Elaine said it is yellow, and that she emailed you about it. She said its the same error as a sample not being logged, so that would be yellow

On Tue, Apr 22, 2014 at 10:58 AM, adamrp notifications@github.com wrote:

Oh. @teravest https://github.com/teravest, to clarify, does it come up as missing metadata (pink error) or missing info (yellow error)?

— Reply to this email directly or view it on GitHubhttps://github.com/qiime/qiime_web_app/issues/678#issuecomment-41065533 .

adamrp commented 10 years ago

Okay, thanks. That's worse than purple. I'll fix this ASAP so we can deploy it tomorrow.

On Tue, Apr 22, 2014 at 11:02 AM, teravest notifications@github.com wrote:

Elaine said it is yellow, and that she emailed you about it. She said its the same error as a sample not being logged, so that would be yellow

On Tue, Apr 22, 2014 at 10:58 AM, adamrp notifications@github.com wrote:

Oh. @teravest https://github.com/teravest, to clarify, does it come up as missing metadata (pink error) or missing info (yellow error)?

— Reply to this email directly or view it on GitHub< https://github.com/qiime/qiime_web_app/issues/678#issuecomment-41065533> .

— Reply to this email directly or view it on GitHubhttps://github.com/qiime/qiime_web_app/issues/678#issuecomment-41066003 .

teravest commented 10 years ago

@adamrp did this one get fixed?

adamrp commented 10 years ago

Not yet

On Mon, Apr 28, 2014 at 9:22 AM, teravest notifications@github.com wrote:

@adamrp https://github.com/adamrp did this one get fixed?

— Reply to this email directly or view it on GitHubhttps://github.com/qiime/qiime_web_app/issues/678#issuecomment-41571562 .