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A deprecated option of demux in "Moving Pictures" tutorial, 2019.4 #405

Closed kubor closed 5 years ago

kubor commented 5 years ago

ref., https://docs.qiime2.org/2019.4/tutorials/moving-pictures/#demultiplexing-sequences

There is a command for demultiplexing but it dose not work with docker image; qiime2/core:2019.4.

qiime demux emp-single \
  --i-seqs emp-single-end-sequences.qza \
  --m-barcodes-file sample-metadata.tsv \
  --m-barcodes-column BarcodeSequence \
  --o-per-sample-sequences demux.qza \
  --o-error-correction-details demux-details.qza

Then, I checked the cli help messages. The "--o-error-correction-details" option is may be deprecated, isn't it?

thermokarst commented 5 years ago

We have not released 2019.4 on docker yet, not sure what image you might be looking at. As for that output, it is not deprecated, it is brand new in 2019.4. Thanks!

kubor commented 5 years ago

oh, I see... sry for this.

I used the image tagged 2019.1., but I think that is 2019.4. Thanks.