qiime2 / galaxy-tools

Official QIIME 2 tools for Galaxy
BSD 3-Clause "New" or "Revised" License
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MISC: minor improvements after testing #31

Closed ebolyen closed 1 year ago

ebolyen commented 1 year ago

After experimenting with the tools downloaded from the test toolshed, it's very clear that ${tool.id} should not be used in output names, it's really weird. image

Upshot, it's easy to fix, and otherwise everything appears to be working.

This PR also enables the "real" toolshed, however I haven't added the API key to secrets yet, so don't merge the re-rendered PRs until I get to that.