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qiime2 / q2-composition

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IMP: da-plots should take `FeatureData[Taxonomy]` as optional input #113

Open gregcaporaso opened 1 year ago

gregcaporaso commented 1 year ago

I received a feature request for full taxonomic annotation in the da-plots visualization without collapsing the feature table, which makes sense for maximizing resolution. We should add support for providing FeatureData[Taxonomy] to provide annotation of features in the viz (I imagine this would just show up in the tool tip, for readability - EDIT: After this PR is merged, full feature annotations could be included on y-axis labels, if that's desired).

colinbrislawn commented 1 year ago

Forums x-ref 26974

colinbrislawn commented 4 months ago

Current workaround is to run qiime taxa collapse first as shown at the very bottom of this page. https://docs.qiime2.org/2024.2/tutorials/moving-pictures/#differential-abundance-testing-with-ancom-bc