The dada2 denoise-paired documentation currently reads:
After this parameter is applied there must
still be at least a 20 nucleotide overlap between the
forward and reverse reads.
While the new default minoverlap in dada2 is 12 (and has been I believe for the last couple of versions. Just needs to be updated.
Also probably need to update the error message too.
The dada2 denoise-paired documentation currently reads:
While the new default minoverlap in dada2 is 12 (and has been I believe for the last couple of versions. Just needs to be updated. Also probably need to update the error message too.