BUG: passing one or more filtering parameters to `dereplicate-sequences` results in error

qiime2 / q2-vsearch

vsearch plugin for QIIME 2

BSD 3-Clause "New" or "Revised" License

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BUG: passing one or more filtering parameters to `dereplicate-sequences` results in error #97

Open colinvwood opened 6 months ago

colinvwood commented 6 months ago

Forum users have reported errors using the dereplicate-sequences action when providing the --p-min-seq-length and/or the --p-min-unique-size parameters here and here. In one case, removing the --p-min-unique-size parameter (while changing no other variables) allowed the action to complete.

There is one test covering the --p-min-seq-length parameter but none covering the --p-min-unique-size parameter; the latter likely introduces a bug somehow.

colinbrislawn commented 1 month ago

Vsearch is working as intended (I think!) but the following steps fail when trying to build the table.