As @wasade's tests showed deblur runs way faster using the demux functionality. The regular fastq tests takes ~20secs the demux only ~5 on the same dataset.
Coverage increased (+1.2%) to 96.899% when pulling 4011d962f6bc6bca234893c06a38e874874dba21 on antgonza:adding-demux into 3f9f867e029ccfeb49db662179d30a493e5787d1 on qiita-spots:master.
Coverage increased (+1.2%) to 96.923% when pulling 0d7980897d8f8701ab7444ed6900e089d7df5b95 on antgonza:adding-demux into 3f9f867e029ccfeb49db662179d30a493e5787d1 on qiita-spots:master.
As @wasade's tests showed deblur runs way faster using the demux functionality. The regular fastq tests takes ~20secs the demux only ~5 on the same dataset.