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qiita-spots / qp-knight-lab-processing

BSD 3-Clause "New" or "Revised" License
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Hardcoded information in amplicon processing #50

Closed wasade closed 1 year ago

wasade commented 1 year ago

It's unclear why there is a hard coded sequencing run and other details in the amplicon processing, see https://github.com/qiita-spots/qp-knight-lab-processing/blob/8696401a3aa4bdce6135b5a66e6186af8da603b8/qp_klp/process_amplicon_job.py#L329-L355

charles-cowart commented 1 year ago

This was part of a kludge written to support unittests when running locally or under CI, as opposed to production.

This was removed when the qp-klp was refactored in late-spring/early summer '23.