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qinqian / lisa

epigenome analysis to rank transcription factors
http://lisa.cistrome.org
MIT License
29 stars 4 forks source link

ValueError: Solver lbfgs supports only 'l2' or 'none' penalties, got l1 penalty. #5

Closed ChangliangWang closed 4 years ago

ChangliangWang commented 4 years ago

Hi Qian,

When I running lisa, I encountered the above problem. The error is caused by that 'lbfgs' solver doesn't support l1 penalty ('liblinear' solver supports l1 penalty). Have you ever encountered this problem and how did you fix it?

Thanks very much for your help.

Best wishes, Changliang.

qinqian commented 4 years ago

Hi Changliang,

Yes, we've encountered such a problem before, could you try to downgrade the sklearn version to 0.21.3?

Best, Qian

ChangliangWang commented 4 years ago

Hi Qian,

Thanks very very very much for your suggestion. It worked fine for me.

Best wishes, Changliang.