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qiskit-advocate / qamp-fall-21

Qiskit advocate mentorship program (QAMP) fall 21 cohort (Sep - Dec 2021)
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Create tools for the protein folding problem in Qiskit Nature #9

Open pbark opened 2 years ago

pbark commented 2 years ago

Description

Protein folding is the newest sampling problem to be released in qiskit nature 0.2.0. We would like to implement some convenience tools and extend the implementation to allow for better result interpretation and visualization of the final output.

Related issues from qiskit-nature: https://github.com/Qiskit/qiskit-nature/issues/313 https://github.com/Qiskit/qiskit-nature/issues/235 https://github.com/Qiskit/qiskit-nature/issues/236

Mentor/s

co mentoring by @pbark, Qiskit Nature core developer / researcher and @dlasecki, Qiskit Applications software engineer

Type of participant

Requirements:

Number of participants

1 person

Deliverable

Implementation for qiskit nature. A PR related to this would be a tangible deliverable.

qiaoyi213 commented 2 years ago

My name is QiaoYi Lin. I'm interested in this topic. I very want to contributed to qiskit especially biological computing and protein folding problem.

singhmeet11 commented 2 years ago

Hi @pbark and @dlasecki, I am really interested in protein folding problem as it will be really helpful in drug discovery in the upcoming years. As a matter of fact I have been pursuing a project related to the same using a different approach, the Quantum Alternating Operator Ansatz.

I was wondering what kind of upgrades do you have in mind ?

And I think your paper "Resource-Efficient Quantum Algorithm for Protein Folding" is really intuitive and the fact that it is so easy to implement using Qiskit is super awesome. Hoping to work under your guidance. Thanks

HuangJunye commented 2 years ago

@dlasecki @mattwright99 Can you please comment in the issue so that I can assign you?

dlasecki commented 2 years ago

@dlasecki @mattwright99 Can you please comment in the issue so that I can assign you?

Ok

mattwright99 commented 2 years ago

Thanks @HuangJunye

HuangJunye commented 2 years ago

@mattwright99 Can you please upload your presentation here, even if you are not presenting? Thank you!

mattwright99 commented 2 years ago

#9 Create tools for the protein folding problem in Qiskit Nature.pdf

anamariarojas123 commented 2 years ago

@mattwright99 Please submit materials for checkpoint 2. :)

mattwright99 commented 2 years ago

QAMP-checkin-2-visual QAMP-checkin-2-doc.pdf