Issues with plots - Githubissues

A list of issues with plots - nothing urgent but could be tidied up before this years assessment round:

[x] q_over_time plot has non-integer years (e.g., 1962.5) and y-axis needs to start at zero
[x] actually - a lot of the plots y-axis need to start at zero
[ ] biomass_vuln plot for CRA 5 MCMC y-axis extends way beyond the plot content for some reason - this will be an issue with the plot starting at zero
[x] data_extent plot should be bigger if there are two regions (or more) defined
[x] the fit to sex-ratio plots, the 0 and the 1 for the y-axis overlap
[x] the fishing mortality plot should get rid of the line during SS up to 1979 (i.e., the years which are not being modelled)
[x] need a recruitment by region comparison figure
[x] comparison plots need to begin at zero also

To make a plot start at zero properly the ggplot code is:

scale_y_continuous(limits = c(0,NA), expand = expansion(mult = c(0, 0.1)))

quantifish / rlsd