Sparse tracks generate errors with compareDatasets(). Currently alpha calculation can fail, resulting in a crash. A solution here is to run calculateMSD() less stringently by decreasing the N and short parameters. However, a better solution would be to deal with failures better so that there is not an overall crash.
Related to this, there is no easy way to pass parameters to change the defaults using this workflow.
Sparse tracks generate errors with
compareDatasets(). Currently alpha calculation can fail, resulting in a crash. A solution here is to runcalculateMSD()less stringently by decreasing theNandshortparameters. However, a better solution would be to deal with failures better so that there is not an overall crash.Related to this, there is no easy way to pass parameters to change the defaults using this workflow.