Move to `pyproject.toml` only structure

[paddyroddy]

Fixes #212. Needs testing.

[paddyroddy]

Linting failure is expected due to #213

[p-j-smith]

Linting failure is expected due to https://github.com/quantumjot/BayesianTracker/pull/213

Maybe it's best not to add new linting tools or rules in this pr as we'll end up with the same problem as in #213. Can you base the pyproject.toml on the current setup.cfg in main rather than the one from #213?

[paddyroddy]

Can you reply to me on slack?

[paddyroddy]

Linting failure is expected due to #213

Maybe it's best not to add new linting tools or rules in this pr as we'll end up with the same problem as in #213. Can you base the pyproject.toml on the current setup.cfg in main rather than the one from #213?

I have pulled the lastest main, that is what I rebased on.

[paddyroddy]

I've only added toml-sort-fix as that helps me ensure it is valid TOML format

[paddyroddy]

I now get what you mean - it wasn't clear - I have removed ruff. However, flake8 isn't compatible with pyproject.toml - see PyCQA/flake8#234. So I've had to add a .flake8 for now.

[codecov-commenter]

Codecov Report

Patch coverage has no change and project coverage change: -4.62 :warning:

Comparison is base (696ee5b) 87.24% compared to head (5c1467d) 82.63%.

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Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #214 +/- ## ========================================== - Coverage 87.24% 82.63% -4.62% ========================================== Files 17 19 +2 Lines 1427 1549 +122 Branches 0 269 +269 ========================================== + Hits 1245 1280 +35 - Misses 182 193 +11 - Partials 0 76 +76 ``` | [Impacted Files](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe) | Coverage Δ | | |---|---|---| | [btrack/io/exporters.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2lvL2V4cG9ydGVycy5weQ==) | `72.22% <0.00%> (-11.12%)` | :arrow_down: | | [btrack/io/hdf.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2lvL2hkZi5weQ==) | `72.79% <0.00%> (-9.97%)` | :arrow_down: | | [btrack/napari/reader.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL25hcGFyaS9yZWFkZXIucHk=) | `72.41% <0.00%> (-6.90%)` | :arrow_down: | | [btrack/io/\_localization.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2lvL19sb2NhbGl6YXRpb24ucHk=) | `86.04% <0.00%> (-5.82%)` | :arrow_down: | | [btrack/core.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2NvcmUucHk=) | `82.95% <0.00%> (-5.39%)` | :arrow_down: | | [btrack/io/utils.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2lvL3V0aWxzLnB5) | `86.04% <0.00%> (-4.66%)` | :arrow_down: | | [btrack/optimise/optimiser.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL29wdGltaXNlL29wdGltaXNlci5weQ==) | `79.06% <0.00%> (-4.66%)` | :arrow_down: | | [btrack/config.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2NvbmZpZy5weQ==) | `91.93% <0.00%> (-3.23%)` | :arrow_down: | | [btrack/models.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL21vZGVscy5weQ==) | `89.76% <0.00%> (-3.15%)` | :arrow_down: | | [btrack/btypes.py](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe#diff-YnRyYWNrL2J0eXBlcy5weQ==) | `80.86% <0.00%> (-1.44%)` | :arrow_down: | | ... and [3 more](https://codecov.io/gh/quantumjot/BayesianTracker/pull/214?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Alan+R+Lowe)

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[paddyroddy]

Have gone through and made 3.10 the default everywhere, and removed references to 3.7.

[deprecated-napari-hub-preview-bot[bot]]

Preview page for your plugin is ready here: https://preview.napari-hub.org/quantumjot/BayesianTracker/214 Created: 2023-03-09T16:55:06.242845

[paddyroddy]

Drop in coverage due to checking branching - i.e. expected.