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quinlan-lab / STRling

Detect novel (and reference) STR expansions from short-read data
MIT License
61 stars 9 forks source link

report 0-len alignments in debug mode. #112

Closed hdashnow closed 1 year ago

hdashnow commented 1 year ago

Could be useful in debugging memory issues later.

hdashnow commented 1 year ago

@brentp I recall you had memory concerns. Anything else I should report on for this to help future debugging if it becomes an issue?

brentp commented 1 year ago

I think you could report the qname so the user can find and see the alignment if they choose.