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quinlan-lab / STRling

Detect novel (and reference) STR expansions from short-read data
MIT License
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assign_reads_locus produces bad indices #35

Closed hdashnow closed 4 years ago

hdashnow commented 4 years ago

Sometimes right index < left index. I haven't figured out when/why yet

For example ri = 0 and li = 1

hdashnow commented 4 years ago

Likely offending function: https://github.com/hdashnow/STRling/blob/2181948dbaca2a3293f84e88ffa227f2a32f98c1/src/strpkg/callclusters.nim#L14

hdashnow commented 4 years ago

Resolved in #36