code and documentation for AD gene set; complement of ad gene set in …

[jimhavrilla]

…bed format and genome space

removed exome flattening script, replaced with bedtools merge, added README.md

fix to make.sh that merges after gene match

[brentp]

this looks better. so the output for ad_genes looks reasonable and the complement is less then the whole genome?

[jimhavrilla]

Yessir it's less than the genome alright

On Sat, Jul 15, 2017 at 8:16 PM Brent Pedersen - Bioinformatics < notifications@github.com> wrote:

this looks better. so the output for ad_genes looks reasonable and the complement is less then the whole genome?

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-- Jim Havrilla PhD Candidate in Human Genetics, University of Utah Accelerated BS/MS in Biomedical Engineering, Drexel University '12, Concentration: Bioinformatics "Memory, comprehension, communication, motivation"

[jimhavrilla]

ok

Jim Havrilla PhD Candidate in Human Genetics, University of Utah Accelerated BS/MS in Biomedical Engineering, Drexel University '12, Concentration: Bioinformatics "Memory, comprehension, communication, motivation"

On Mon, Jul 17, 2017 at 10:35 AM, Brent Pedersen - Bioinformatics < notifications@github.com> wrote:

@brentp requested changes on this pull request.

ok. this seems to be working now. can you just bgzip and tabix ad_genes.bed as well?

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[brentp]

and tabix

[jimhavrilla]

ok

[brentp]

thanks. now can you squash.