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quinlan-lab / vcf2db

create a gemini-compatible database from a VCF
MIT License
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citing VCF2DB #49

Closed Phillip-a-richmond closed 3 years ago

Phillip-a-richmond commented 6 years ago

Brent, We are preparing a manuscript for resubmission and within we are providing a full, detailed pipeline which integrates tools from the Quinlan lab, including:

VCFAnno, VCF2DB, GEMINI.

VCFAnno and GEMINI have papers to cite, but how would you like VCF2DB cited? The GitHub page?

Thanks, Phil

brentp commented 6 years ago

Hi Phil, that's great to hear. I think that citing the gemini paper is sufficient and if you care to cite vcf2db, that would be directly to the github repo. Thanks!

Phillip-a-richmond commented 6 years ago

Okay and with VCF2DB do you plan on versioning it? I think the last pull I did was January 22nd, 2018 after you added the --a-ok option

brentp commented 6 years ago

You could just reference the commit that you used. We'll get out a versioned release this year, but it won't be for a couple months, I think.