Running and debugging the Python Code

[MOJTABAFA]

@LindberghLi For running and debugging the python code , I need following information to make sure about the functionality of the program, after that we can work on benchmarking of this program and the C++ version one :

1. Input file (already you gave me)
2. The desired output file for that specific input ( for checking if the program works properly.
3. Other items values like epsilon, T, D, M, P, percentage of non zero elements and etc.,

Please provide me this info as soon as you can .

[MOJTABAFA]

@magsol Solved !------- Dear Dr. Quinn : Here is the first error I faced in running the program , would you please checki it and advise me ? [Anaconda3] C:\Users\Mojtaba Fazli\Desktop>python dictlearningpython.py -i test -d file_d.txt -o file_z.txt -s file_summary.txt -l 1025 -P 75 -n 254 -m 33 -e .0 2 File "dictlearningpython.py", line 129 file_s = str(args['input']) ^ IndentationError: unindent does not match any outer indentation level

[MOJTABAFA]

@magsol Solved !----- even I resolved it , again in other lines it gives the same error, However, the indentation is correct and sometimes I had to re-write the instructions !

[MOJTABAFA]

Solved ! ---- sysntax errors are debugged now. My input file is in desktop, where the original .py file is located. but after running the following error is been appeared :

[Anaconda3] C:\Users\Mojtaba Fazli\Desktop>python DictLearningPythonclean.py -i test.txt -d file_D.txt -o file_Z.txt -s file_Summary -l 1046 -P 528 -n .4 -m 256 -e 0.01 The Input file is loading... Traceback (most recent call last): File "DictLearningPythonclean.py", line 129, in main() File "DictLearningPythonclean.py", line 70, in main S = np.loadtxt(file_s) File "C:\Anaconda3\lib\site-packages\numpy\lib\npyio.py", line 693, in loadtxt

fh = iter(open(fname))

FileNotFoundError: [Errno 2] No such file or directory: 'test.txt'

[MOJTABAFA]

@magsol I already modified the path and this problem is solved too. but again there is another problem which belongs to set the parameters. As I emphasized in first comment ,Since I'm not expert in this program, I need the input parameters from xiang. Unless I dont have the parameter I cannot check with more scrutiny:

[Anaconda3] C:\Users\Mojtaba Fazli\Desktop>python DictLearningPythonclean.py -i test.txt -d file_D.txt -o file_Z.txt -s file_Summary -l 1046 -P 528 -n .4 -m 256 -e 0.01 The Input file is loading... Training ....

Initalization is complete! Analyzing component 1 ... Traceback (most recent call last): File "DictLearningPythonclean.py", line 129, in main() File "DictLearningPythonclean.py", line 98, in main v = np.dot(S,u_old) ValueError: shapes (170,39510) and (1046,) not aligned: 39510 (dim 1) != 1046 (d im 0)

Thanks

[magsol]

@MOJTABAFA:

Several things.

• What IDE are you using? Please configure it to enforce indentation that is 4 spaces at each level; that will prevent the indentation errors you were seeing before. Also, enable "translate tabs to spaces" as well, so if you do hit the "tab" button, it creates 4 spaces.
• The ValueError message you are receiving in your last post means you are trying to multiply two arrays with different dimensions. It looks like line 98, the multiplication of S and u_old, has dimensions that don't line up; S is 170x39510, and u_old is a vector of length 1046. There is a bug somewhere that will need to be fixed so these can be multiplied.

@LindberghLi:

Can you post some sample input data and the expected output?

[MOJTABAFA]

@magsol

• I'm using Sublime text 3, but runing the program in anaconda console(because of importing argements) , in sublime every thing is shown as correct but there would some indentation errors while running in anaconda. I had to delete and re-write some lines , after that , every thing is solved.
• For value error, I know what do you mean , but actually I gave the input of 1046 ( some random value),because I didn't know about permitted values and because of that I think xiang who is expert in this program, should help me on applying appropriate input data . Thanks.

[magsol]

@MOJTABAFA, in Sublime Text, make sure you have these settings in your user profile configuration:

"translate_tabs_to_spaces": true,
"wrap_width": 80,
"tab_size": 4

Those should fix the inconsistencies between Sublime Text and the console.

[XiangLi-Shaun]

I have created two folders in the project, named "testSe1" and "testSet2", which contains the input file ("S.txt"), the parameter setting ("parameter.txt") and the output files ("D_groundtruth.txt" and "z_groundtruth.txt'). These simulated data are of very small scale, and solely for the purpose of testing whether the current code are running.

[MOJTABAFA]

Thanks Xiang, I already left the lab, tomorrow will back and complete it. Thanks Dr. Quinn for all lessons you are teaching me.