quinngroup / ornet

Organellar segmentation, tracking, and network modeling.
MIT License
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Implement Kernel Density Estimation #19

Open Micky774 opened 3 years ago

Micky774 commented 3 years ago

Consider using a kernel density estimation instead of relying on standard peak detection on the luminosity data. Using the KDE will transform the image into a continuous pdf (component of whatever kernel posteriors are chosen, e.g. Gaussian) which makes peak detection much easier. Also introduces a pseudo smoothing parameter, h, which can be played with to find suitable results.