qunfengdong / BLCA

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TypeError: range() integer end argument expected, got float #3

Closed duxuhao closed 6 years ago

duxuhao commented 6 years ago

Hi there,

Things were good when I did a couple runs using the default bootstrap value of 100. However when I tried a greater bootstrap value (200, 500 etc), very soon the process ended with the following messages:

blastdbcmd is located in your PATH muscle is located in your PATH blastn is located in your PATH

Running blast!! Blastn Finished!! 1 > Read in blast output! 3 > Read in taxonomy information! Traceback (most recent call last): File "/home/ubuntu/BLCA/2.blca_main.py", line 329, in for j in range(nper): TypeError: range() integer end argument expected, got float.

Please let me know if you need further details.

Cheers, Eng

yingeddi2008 commented 6 years ago

Hi Eng,

Thanks for checking out our program. I will look into it soon.

Huaiying (Eddi) Lin

On Nov 30, 2017, at 19:46, Xuhao Du (Peter) notifications@github.com wrote:

Hi there,

Things were good when I did a couple runs using the default bootstrap value of 100. However when I tried a greater bootstrap value (200, 500 etc), very soon the process ended with the following messages:

blastdbcmd is located in your PATH muscle is located in your PATH blastn is located in your PATH

Running blast!! Blastn Finished!! 1 > Read in blast output! 3 > Read in taxonomy information! Traceback (most recent call last): File "/home/ubuntu/BLCA/2.blca_main.py", line 329, in for j in range(nper): TypeError: range() integer end argument expected, got float.

Please let me know if you need further details.

Cheers, Eng

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yingeddi2008 commented 6 years ago

Hi Eng,

The bug should be fixed now. It was a type error.

Thanks for using our program.

Please feel free to contact if the problem continues.

Eddi

engchua commented 6 years ago

Thanks Eddi, looking all good now.

Cheers, Eng