qupath / qupath-docs

QuPath documentation
http://qupath.readthedocs.io/
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Provide an example script for exporting images as an OME-TIFF #84

Open MarkZaidi opened 1 year ago

MarkZaidi commented 1 year ago

Currently, the Exporting images page doesn't have a demo for how to export images loaded into QuPath as a .ome.tif. While the Tile Exporter section does support this, some users may want to export whole images, especially if they were aligned and concatenated into a sparse image. Maybe something like this: https://forum.image.sc/t/batch-convert-dicom-to-tiff-files/87987/4?u=mark_zaidi