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r-hub / rhub

R-hub API client
https://r-hub.github.io/rhub/
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Windows R-hub builder produces these errors, while Ubuntu and Fedora don't #520

Closed ThomasNiemand closed 4 months ago

ThomasNiemand commented 2 years ago

Hi,

I tried my best but I cannot replicate these errors exclusively shown in the Windows R-hub builder (Windows Server 2022, R-devel, 64 bit). The other R-hub builders are without any error, warning or note (Ubuntu Linux 20.04.1 LTS, R-release, GCC, Fedora Linux, R-devel, clang, gfortran). Perhaps something in the config of the builder is broken.

Best wishes, Thomas

Snip ---

replacement repositories: CRAN: https://cloud.r-project.org/

'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories: CRAN: https://cloud.r-project.org/

'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories: CRAN: https://cloud.r-project.org/

'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories: CRAN: https://cloud.r-project.org/

Quitting from lines 145-147 (FCO.Rmd) Error: processing vignette 'FCO.Rmd' failed with diagnostics: 2 nodes produced errors; first error: there is no package called 'dplyr' --- failed re-building 'FCO.Rmd'

SUMMARY: processing the following file failed: 'FCO.Rmd'

Error: Vignette re-building failed. Execution halted --- Snip

gaborcsardi commented 2 years ago

2 nodes produced errors; first error: there is no package called 'dplyr'

Check the log and see dplyr if dplyr was installed and if not then why not.

ThomasNiemand commented 2 years ago

Thx. Dplyr is suggested by simstandard, as indicated in the log. Why this builder does not install & load it, but the others do, is out of my control.

gaborcsardi commented 2 years ago

You need to read the log, or link it here. We can't help you without the log.

gaborcsardi commented 4 months ago

This issue is about the previous R-hub system, it does not apply to the new system, so I am closing it now. Please see https://r-hub.github.io/rhub/ for the new system, R-hub v2.